RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ERICH2A1L162 156 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 HTR3EA5X5Y0 456 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 STMND1H3BQB6 276 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 OLFM2O95897 454 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 IFIT2P09913 472 aaKnown RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 GNAT1P11488 350 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 GNL1P36915 607 aaPredicted RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 ADCY8P40145 1251 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 SARSP49591 514 aaKnown RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 SQSTM1Q13501 440 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 LAMC2Q13753 1193 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CEP78Q5JTW2 689 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 FAM209AQ5JX71 171 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 TLDC1Q6P9B6 456 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 TTLL7Q6ZT98 887 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 ZER1Q7Z7L7 766 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 COLGALT2Q8IYK4 626 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 GALNT15Q8N3T1 639 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CDC26Q8NHZ8 85 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 PPP1R14CQ8TAE6 165 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CDKL2Q92772 493 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 FATE1Q969F0 183 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 TCEANC2Q96MN5 208 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 TSC22D3Q99576 134 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 XAB2Q9HCS7 855 aaKnown RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CD93Q9NPY3 652 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 SAGE1Q9NXZ1 904 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 MOCS1Q9NZB8 636 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 EXOC7Q9UPT5 735 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 ATAD2Q6PL18 1390 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 BLMP54132 1417 aaPredicted RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 TMCC1O94876 653 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 GUCA1CO95843 209 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 SSBP05455 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CDK4P11802 303 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 ST13P50502 369 aaKnown RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 BLVRAP53004 296 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 COPS2P61201 443 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 MTMR2Q13614 643 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 DSC3Q14574 896 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 PLCB4Q15147 1175 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 STK11Q15831 433 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 MIS18BP1Q6P0N0 1132 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 HOMER1Q86YM7 354 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 SULF1Q8IWU6 871 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 REXO1L1PQ8IX06 675 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 SYTL1Q8IYJ3 562 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 IFNL2Q8IZJ0 200 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 IPMKQ8NFU5 416 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 TRPC4APQ8TEL6 797 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 LZICQ8WZA0 190 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 SDCCAG3Q96C92 435 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 NRBF2Q96F24 287 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 TBCBQ99426 244 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 HNRNPABQ99729 332 aaKnown RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 NTPCRQ9BSD7 190 aaKnown RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CCSER1Q9C0I3 900 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CSRNP2Q9H175 543 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CYP4F11Q9HBI6 524 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 PREBQ9HCU5 417 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 KCNQ5Q9NR82 932 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 STIM2Q9P246 746 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 EXOC6BQ9Y2D4 811 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 FHOD1Q9Y613 1164 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 RICTORQ6R327 1708 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 PRAG1Q86YV5 1406 aa5.43□□□□□ -1.54
EPHA3-202ENST00000452448 CDK12Q9NYV4 1490 aaPredicted RBP5.43□□□□□ -1.54
EPHA3-202ENST00000452448 EIF2AK4Q9P2K8 1649 aaKnown RBP5.42□□□□□ -1.54
EPHA3-202ENST00000452448 CYP2D7A0A087X1C5 515 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 ST20-MTHFSA0A0A6YYL1 179 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 HDAC3O15379 428 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 AKAP10O43572 662 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 SUPT3HO75486 399 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 TIPRLO75663 272 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 EZRP15311 586 aaKnown RBP5.42□□□□□ -1.54
EPHA3-202ENST00000452448 PRKACBP22694 351 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 DNAJB1P25685 340 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 LIG3P49916 1009 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 CETN1Q12798 172 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 DYNC1I2Q13409 638 aaKnown RBP5.42□□□□□ -1.54
EPHA3-202ENST00000452448 NAA30Q147X3 362 aaPredicted RBP5.42□□□□□ -1.54
EPHA3-202ENST00000452448 ASIC2Q16515 512 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 C15orf59Q2T9L4 293 aaPredicted RBP5.42□□□□□ -1.54
EPHA3-202ENST00000452448 WSCD2Q2TBF2 565 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 ANKDD1AQ495B1 522 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 USH1GQ495M9 461 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 C8orf34Q49A92 452 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 INTS3Q68E01 1043 aaKnown RBP5.42□□□□□ -1.54
EPHA3-202ENST00000452448 CEP128Q6ZU80 1094 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 NLRP9Q7RTR0 991 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 ATG9AQ7Z3C6 839 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 CCDC83Q8IWF9 413 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 TBC1D21Q8IYX1 336 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 UBR7Q8N806 425 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 CCHCR1Q8TD31 782 aa5.42□□□□□ -1.54
EPHA3-202ENST00000452448 BCL7CQ8WUZ0 217 aaPredicted RBP5.42□□□□□ -1.54
EPHA3-202ENST00000452448 EMID1Q96A84 441 aaPredicted RBP5.42□□□□□ -1.54
EPHA3-202ENST00000452448 GPRASP2Q96D09 838 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms