RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ZSCAN31Q96LW9 406 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 INPP4AQ96PE3 977 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 BACH2Q9BYV9 841 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 UBE2OQ9C0C9 1292 aaKnown RBP6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 PDLIM7Q9NR12 457 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 SH3GLB2Q9NR46 395 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 KCNH7Q9NS40 1196 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 TRMT13Q9NUP7 481 aaKnown RBP6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 PCDHA4Q9UN74 947 aa6.57□□□□□ -1.36
HMGB3P24-201ENST00000433260 FRMPD4Q14CM0 1322 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 GSTTP1A0A1W2PQM5 241 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 ESYT2A0FGR8 921 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 H3BRB1 525 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 MEIS1O00470 390 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 MAFGO15525 162 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 B4GALT4O60513 344 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 CD4P01730 458 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 CYP2C9P11712 490 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 KCNA2P16389 499 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 XBP1P17861 261 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 CYP2C18P33260 490 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 TCF7P36402 384 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 GCGRP47871 477 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 CCL23P55773 120 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 ZNF200P98182 395 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 SKIV2LQ15477 1246 aaKnown RBP6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 INF2Q27J81 1249 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 KIAA0753Q2KHM9 967 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 PRR16Q569H4 304 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 TRMT1LQ7Z2T5 733 aaKnown RBP6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 ANKRD33Q7Z3H0 272 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 FAM126BQ8IXS8 530 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 C7orf31Q8N865 590 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 GIMAP8Q8ND71 665 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 PPTC7Q8NI37 304 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 WASF1Q92558 559 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 GJA10Q969M2 543 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 CDHR1Q96JP9 859 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 TOX2Q96NM4 488 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 GPR20Q99678 358 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 C16orf70Q9BSU1 422 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 PHF20Q9BVI0 1012 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 TUT1Q9H6E5 874 aaKnown RBP6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 AGO4Q9HCK5 861 aaKnown RBP6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 HDAC6Q9UBN7 1215 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 NOD1Q9Y239 953 aa6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 TRIP12Q14669 1992 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P24-201ENST00000433260 UMODL1Q5DID0 1318 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 MROH7Q68CQ1 1323 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 STK36Q9NRP7 1315 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 CCDC194A0A1B0GVG4 234 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 BTBD18B2RXH4 712 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 KIAA0355O15063 1070 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 EDIL3O43854 480 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 CD2BP2O95400 341 aaKnown RBP6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 TIMP1P01033 207 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 LGALS2P05162 132 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 CYP3A4P08684 503 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 ACRP10323 421 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 ATP2B1P20020 1258 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 MARK3P27448 753 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 SREBF1P36956 1147 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 ITGB3BPQ13352 177 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 TRIM29Q14134 588 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 NONOQ15233 471 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 NPY5RQ15761 445 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 PTGISQ16647 500 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 LETM2Q2VYF4 491 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 EARS2Q5JPH6 523 aaKnown RBP6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 HABP4Q5JVS0 413 aaKnown RBP6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 KRT40Q6A162 431 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 MCTP2Q6DN12 878 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 GDF6Q6KF10 455 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 METTL7BQ6UX53 244 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 PIK3AP1Q6ZUJ8 805 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 TRIM50Q86XT4 487 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 FAM184AQ8NB25 1140 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 SPIRE2Q8WWL2 714 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 SEPT1Q8WYJ6 367 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 GLG1Q92896 1179 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 EMID1Q96A84 441 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 SCLYQ96I15 445 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 TBC1D32Q96NH3 1257 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 GDF15Q99988 308 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 SENP7Q9BQF6 1050 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 SDF4Q9BRK5 362 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 ZNF577Q9BSK1 485 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 RNPEPQ9H4A4 650 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 SETD4Q9NVD3 440 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 SLC9A2Q9UBY0 812 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 TSR3Q9UJK0 312 aaKnown RBP6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 KAT6AQ92794 2004 aa6.55□□□□□ -1.36
HMGB3P24-201ENST00000433260 IGLV3-22A0A075B6J6 115 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 M0R2N6 131 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 HAS3O00219 553 aa6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 IPO5O00410 1097 aaKnown RBP6.54□□□□□ -1.36
HMGB3P24-201ENST00000433260 MSH4O15457 936 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms