RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 COL20A1Q9P218 1284 aa17.42■□□□□ 0.38
TVP23C-203ENST00000428082 CDC23Q9UJX2 597 aa17.42■□□□□ 0.38
TVP23C-203ENST00000428082 SPDYE3A6NKU9 549 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 ERCC3P19447 782 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 CDC25AP30304 524 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 KRT9P35527 623 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
TVP23C-203ENST00000428082 SLC30A10Q6XR72 485 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 RNF207Q6ZRF8 634 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 CHST13Q8NET6 341 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 OR8K1Q8NGG5 319 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 RAB34Q9BZG1 259 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 LRRC27Q9C0I9 530 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 EDIL3O43854 480 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 ZRANB2O95218 330 aaKnown RBP eCLIP17.41■□□□□ 0.38
TVP23C-203ENST00000428082 FOSP01100 380 aaPredicted RBP17.41■□□□□ 0.38
TVP23C-203ENST00000428082 LETM2Q2VYF4 491 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 CNNM4Q6P4Q7 775 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 TEX2Q8IWB9 1127 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 GPRC5AQ8NFJ5 357 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 A1CFQ9NQ94 594 aaKnown RBP17.41■□□□□ 0.38
TVP23C-203ENST00000428082 MORF4L1Q9UBU8 362 aa17.41■□□□□ 0.38
TVP23C-203ENST00000428082 LUC7L2Q9Y383 392 aaKnown RBP17.41■□□□□ 0.38
TVP23C-203ENST00000428082 SLC25A27O95847 323 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 TUBBP07437 444 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 PLCG1P19174 1290 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 CCNE1P24864 410 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 BAATQ14032 418 aaPredicted RBP17.4■□□□□ 0.38
TVP23C-203ENST00000428082 TMEM266Q2M3C6 531 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 ZNF569Q5MCW4 686 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 MCTP2Q6DN12 878 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 SYTL5Q8TDW5 730 aaPredicted RBP17.4■□□□□ 0.38
TVP23C-203ENST00000428082 PORCNQ9H237 461 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 CAPN11Q9UMQ6 739 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 ADGRA2Q96PE1 1338 aa17.4■□□□□ 0.38
TVP23C-203ENST00000428082 LCTP09848 1927 aa17.39■□□□□ 0.38
TVP23C-203ENST00000428082 PNMA6AP0CW24 399 aaPredicted RBP17.39■□□□□ 0.37
TVP23C-203ENST00000428082 BRD3Q15059 726 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 TEX35Q5T0J7 233 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 SAMD3Q8N6K7 520 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 P2RX5Q93086 422 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 PURBQ96QR8 312 aaKnown RBP17.39■□□□□ 0.37
TVP23C-203ENST00000428082 NAPGQ99747 312 aaPredicted RBP17.39■□□□□ 0.37
TVP23C-203ENST00000428082 TRIM9Q9C026 710 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 MAP3K20Q9NYL2 800 aaKnown RBP17.39■□□□□ 0.37
TVP23C-203ENST00000428082 CYP39A1Q9NYL5 469 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 STK17AQ9UEE5 414 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 FBXO40Q9UH90 709 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 CPA4Q9UI42 421 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 PRDM4Q9UKN5 801 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 FHOD1Q9Y613 1164 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 PP2D1A8MPX8 630 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 CHMP4BP1P59074 171 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 KRT83P78385 493 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 PDE4DQ08499 809 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 WHAMMP3Q1A5X7 153 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 TTI2Q6NXR4 508 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 IRF2BP1Q8IU81 584 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 CSGALNACT2Q8N6G5 542 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 ZNF507Q8TCN5 953 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 DNAJC7Q99615 494 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 EFCC1Q9HA90 598 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 ARFGAP3Q9NP61 516 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 ZNHIT6Q9NWK9 470 aaKnown RBP17.39■□□□□ 0.37
TVP23C-203ENST00000428082 MAPK8IP1Q9UQF2 711 aa17.39■□□□□ 0.37
TVP23C-203ENST00000428082 FGFR1OPO95684 399 aaKnown RBP17.38■□□□□ 0.37
TVP23C-203ENST00000428082 SREBF1P36956 1147 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 VEGFBP49765 207 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 UBXN2AP68543 259 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 FAM110CQ1W6H9 321 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 ZNF662Q6ZS27 426 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 ANKRD35Q8N283 1001 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 EHBP1Q8NDI1 1231 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 CRYGNQ8WXF5 182 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 TAAR1Q96RJ0 339 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 HAUS4Q9H6D7 363 aa17.38■□□□□ 0.37
TVP23C-203ENST00000428082 EPN1Q9Y6I3 576 aaPredicted RBP17.38■□□□□ 0.37
TVP23C-203ENST00000428082 ZNFX1Q9P2E3 1918 aaKnown RBP17.38■□□□□ 0.37
TVP23C-203ENST00000428082 COPB2P35606 906 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 FXR2P51116 673 aaKnown RBP eCLIP17.37■□□□□ 0.37
TVP23C-203ENST00000428082 ASIC1P78348 528 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 CCNA1P78396 465 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 ARHGAP4P98171 946 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 CRHR2Q13324 411 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 WDR78Q5VTH9 848 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 SV2BQ7L1I2 683 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 SHCBP1Q8NEM2 672 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 MROH8Q9H579 483 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 PVALEFA0A1B0GWK0 134 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 CCDC151A5D8V7 595 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 TRIM49BA6NDI0 452 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 TLR2O60603 784 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 COBLO75128 1261 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 NDUFA10O95299 355 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 TDP2O95551 362 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 BCRP11274 1271 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 TERF2Q15554 542 aa17.37■□□□□ 0.37
TVP23C-203ENST00000428082 NAP1L4Q99733 375 aaKnown RBP17.37■□□□□ 0.37
TVP23C-203ENST00000428082 TUBGCP2Q9BSJ2 902 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms