RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 MAPK4P31152 587 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 STOX1Q6ZVD7 989 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 CNOT7Q9UIV1 285 aaKnown RBP21.35■■□□□ 1.01
PCDH8-202ENST00000377942 ATP8B3O60423 1300 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 ZBTB33Q86T24 672 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 MICALL2Q8IY33 904 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 OATP04181 439 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 TNFAIP2Q03169 654 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 SMIM5Q71RC9 77 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 SMC1BQ8NDV3 1235 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 KRT12Q99456 494 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.35■■□□□ 1.01
PCDH8-202ENST00000377942 RNASELQ05823 741 aaKnown RBP21.35■■□□□ 1.01
PCDH8-202ENST00000377942 CUL4BQ13620 913 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 PIGOQ8TEQ8 1089 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 NLRP4Q96MN2 994 aa21.35■■□□□ 1.01
PCDH8-202ENST00000377942 Q3C1V9 767 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 FAM151AQ8WW52 585 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 ZNF148Q9UQR1 794 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 C19orf81C9J6K1 198 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 WDR46O15213 610 aaKnown RBP21.34■■□□□ 1.01
PCDH8-202ENST00000377942 LRRN2O75325 713 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 IRX5P78411 483 aaPredicted RBP21.34■■□□□ 1.01
PCDH8-202ENST00000377942 NDUFAB1O14561 156 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 HSPA6P17066 643 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 KRT31Q15323 416 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 MAPK6Q16659 721 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 CATSPER4Q7RTX7 472 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 OTUD5Q96G74 571 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 PPP1R13BQ96KQ4 1090 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 NXF1Q9UBU9 619 aaKnown RBP21.34■■□□□ 1.01
PCDH8-202ENST00000377942 ZNF543Q08ER8 600 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 ANAPC4Q9UJX5 808 aa21.34■■□□□ 1.01
PCDH8-202ENST00000377942 GFPT2O94808 682 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 RPS12P25398 132 aaKnown RBP21.33■■□□□ 1.01
PCDH8-202ENST00000377942 PHKA2P46019 1235 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 HDLBPQ00341 1268 aaKnown RBP21.33■■□□□ 1.01
PCDH8-202ENST00000377942 LDHDQ86WU2 507 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 MB21D1Q8N884 522 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 FAM133AQ8N9E0 248 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 TMEM260Q9NX78 707 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 SERPINA10Q9UK55 444 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 MST1RQ04912 1400 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 FCER1AP12319 257 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 MARK3P27448 753 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 INTS5Q6P9B9 1019 aaKnown RBP21.33■■□□□ 1.01
PCDH8-202ENST00000377942 KCNV1Q6PIU1 500 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 FMR1NBQ8N0W7 255 aaPredicted RBP21.33■■□□□ 1.01
PCDH8-202ENST00000377942 GSDMBQ8TAX9 411 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 TMEM131LA2VDJ0 1609 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 DEPDC5O75140 1603 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 VWDEQ8N2E2 1590 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 I3L4J1 428 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 RGS16O15492 202 aaPredicted RBP21.33■■□□□ 1.01
PCDH8-202ENST00000377942 ATF2P15336 505 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 PSMC5P62195 406 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 SLC15A2Q16348 729 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 ARMCX2Q7L311 632 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 CTAGE3PQ8IX95 158 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 XXYLT1Q8NBI6 393 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 FAM149B1Q96BN6 582 aa21.33■■□□□ 1.01
PCDH8-202ENST00000377942 IPO5O00410 1097 aaKnown RBP21.33■■□□□ 1
PCDH8-202ENST00000377942 CTNNA1P35221 906 aaKnown RBP21.33■■□□□ 1
PCDH8-202ENST00000377942 PSMC4P43686 418 aa21.33■■□□□ 1
PCDH8-202ENST00000377942 ATP2C1P98194 919 aaPredicted RBP21.33■■□□□ 1
PCDH8-202ENST00000377942 SLC10A5Q5PT55 438 aa21.33■■□□□ 1
PCDH8-202ENST00000377942 CDC42EP5Q6NZY7 148 aa21.33■■□□□ 1
PCDH8-202ENST00000377942 C16orf86Q6ZW13 317 aa21.33■■□□□ 1
PCDH8-202ENST00000377942 RSRC2Q7L4I2 434 aaKnown RBP21.33■■□□□ 1
PCDH8-202ENST00000377942 NRBP1Q9UHY1 535 aa21.33■■□□□ 1
PCDH8-202ENST00000377942 GDAQ9Y2T3 454 aa21.33■■□□□ 1
PCDH8-202ENST00000377942 ASB14A6NK59 587 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 IFRD2Q12894 506 aaPredicted RBP21.32■■□□□ 1
PCDH8-202ENST00000377942 BSPRYQ5W0U4 402 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 DNAJC24Q6P3W2 148 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 SFR1Q86XK3 245 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 SLC35F6Q8N357 371 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 DYDC2Q96IM9 177 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 C2orf40Q9H1Z8 148 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 RPAP3Q9H6T3 665 aaPredicted RBP21.32■■□□□ 1
PCDH8-202ENST00000377942 ZNF302Q9NR11 478 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 PRKAG2Q9UGJ0 569 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 SARM1Q6SZW1 724 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 VPS52Q8N1B4 723 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 SRBD1Q8N5C6 995 aaKnown RBP21.32■■□□□ 1
PCDH8-202ENST00000377942 ZNF70Q9UC06 446 aaPredicted RBP21.32■■□□□ 1
PCDH8-202ENST00000377942 GMNNO75496 209 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 TKFCQ3LXA3 575 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 POTEDQ86YR6 584 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 PSPC1Q8WXF1 523 aaKnown RBP21.32■■□□□ 1
PCDH8-202ENST00000377942 BPIFA3Q9BQP9 254 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 COG2Q14746 738 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 BBS5Q8N3I7 341 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 IGDCC4Q8TDY8 1250 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 MMP19Q99542 508 aa21.32■■□□□ 1
PCDH8-202ENST00000377942 TOPORSQ9NS56 1045 aaPredicted RBP21.32■■□□□ 1
PCDH8-202ENST00000377942 GRIN3BO60391 1043 aa21.31■■□□□ 1
PCDH8-202ENST00000377942 NME8Q8N427 588 aa21.31■■□□□ 1
PCDH8-202ENST00000377942 PFDN6O15212 129 aa21.31■■□□□ 1
PCDH8-202ENST00000377942 EIF4A3P38919 411 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms