RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ABT1Q9ULW3 272 aaKnown RBP12.66□□□□□ -0.38
SNX1-212ENST00000560861 POTEFA5A3E0 1075 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 MYMKA6NI61 221 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 E9PMD0 336 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 BIN1O00499 593 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 STRNO43815 780 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 COBLO75128 1261 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 SLITRK3O94933 977 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 SREBF2Q12772 1141 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 GRB14Q14449 540 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 MCM6Q14566 821 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 ZRSR1Q15695 479 aaKnown RBP12.65□□□□□ -0.38
SNX1-212ENST00000560861 POTEGQ6S5H5 508 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 RNF214Q8ND24 703 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 RASSF8Q8NHQ8 419 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 NEK9Q8TD19 979 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 DYDC2Q96IM9 177 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 CDHR1Q96JP9 859 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 BPIFA3Q9BQP9 254 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 RGL1Q9NZL6 768 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 PKD2L1Q9P0L9 805 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 WRAP73Q9P2S5 460 aaPredicted RBP12.65□□□□□ -0.38
SNX1-212ENST00000560861 KIAA1024Q9UPX6 916 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 THSD7BQ9C0I4 1608 aa12.65□□□□□ -0.38
SNX1-212ENST00000560861 TLR2O60603 784 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 LYPLA2O95372 231 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 ADORA2AP29274 412 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 MAPK4P31152 587 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 SLC12A3P55017 1021 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 PSMC6P62333 389 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 KRT76Q01546 638 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 SP2Q02086 613 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 EHHADHQ08426 723 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 KCNB1Q14721 858 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 UVSSAQ2YD98 709 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 GNPTABQ3T906 1256 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 L1TD1Q5T7N2 865 aaKnown RBP12.64□□□□□ -0.39
SNX1-212ENST00000560861 ZNF746Q6NUN9 644 aaPredicted RBP12.64□□□□□ -0.39
SNX1-212ENST00000560861 GPR142Q7Z601 462 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 ZNF467Q7Z7K2 595 aaPredicted RBP12.64□□□□□ -0.39
SNX1-212ENST00000560861 RDM1Q8NG50 284 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 DNAJC19Q96DA6 116 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 CPA4Q9UI42 421 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 ARID2Q68CP9 1835 aa12.64□□□□□ -0.39
SNX1-212ENST00000560861 ZSWIM8A7E2V4 1837 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 SLC15A5A6NIM6 579 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 B4DLN1 442 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 DDX39AO00148 427 aaKnown RBP12.63□□□□□ -0.39
SNX1-212ENST00000560861 CHMP2AO43633 222 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 RHOBTB3O94955 611 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 EYA4O95677 639 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 RPN1P04843 607 aaKnown RBP12.63□□□□□ -0.39
SNX1-212ENST00000560861 PLA2G4BP0C869 781 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 ZNF165P49910 485 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 JAK3P52333 1124 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 CYP4A11Q02928 519 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 PDE4DQ08499 809 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 CTTNQ14247 550 aaKnown RBP12.63□□□□□ -0.39
SNX1-212ENST00000560861 NCAPHQ15003 741 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 MORN1Q5T089 497 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 CYP4F22Q6NT55 531 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 SV2BQ7L1I2 683 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 MIER3Q7Z3K6 550 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 PLEKHH3Q7Z736 793 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
SNX1-212ENST00000560861 SYT2Q8N9I0 419 aaPredicted RBP12.63□□□□□ -0.39
SNX1-212ENST00000560861 USP6NLQ92738 828 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 MED15Q96RN5 788 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 KATNBL1Q9H079 304 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 DIS3Q9Y2L1 958 aaKnown RBP12.63□□□□□ -0.39
SNX1-212ENST00000560861 TELO2Q9Y4R8 837 aa12.63□□□□□ -0.39
SNX1-212ENST00000560861 MYH9P35579 1960 aaKnown RBP12.63□□□□□ -0.39
SNX1-212ENST00000560861 RBM47A0AV96 593 aaKnown RBP12.62□□□□□ -0.39
SNX1-212ENST00000560861 ASB14A6NK59 587 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 WDR64B1ANS9 1081 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 CA12O43570 354 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 IGHA2P01877 340 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
SNX1-212ENST00000560861 CYP11B2P19099 503 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 UBA1P22314 1058 aaKnown RBP12.62□□□□□ -0.39
SNX1-212ENST00000560861 SFNP31947 248 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 AMPD3Q01432 767 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 NOGQ13253 232 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 CRHR2Q13324 411 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 UGCGQ16739 394 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 KMT5BQ4FZB7 885 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 WDR78Q5VTH9 848 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 ISM2Q6H9L7 571 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 CCDC62Q6P9F0 684 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 MAMDC4Q6UXC1 1216 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 MLKLQ8NB16 471 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 LXNQ9BS40 222 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 ZFYVE28Q9HCC9 887 aa12.62□□□□□ -0.39
SNX1-212ENST00000560861 PVALEFA0A1B0GWK0 134 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms