RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CTCFLQ8NI51 663 aaPredicted RBP13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 HLA-CQ95604 372 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 COL4A6Q14031 1691 aa13.31□□□□□ -0.28
PRPF40B-212ENST00000551111 STAM2O75886 525 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 MARK3P27448 753 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 MCM5P33992 734 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 ARHGAP4P98171 946 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 TRAF1Q13077 416 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 NFXL1Q6ZNB6 911 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 CYP2W1Q8TAV3 490 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 TOP1MTQ969P6 601 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 TCEANC2Q96MN5 208 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 COG5Q9UP83 839 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 INSL6Q9Y581 213 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 EMSYQ7Z589 1322 aa13.3□□□□□ -0.28
PRPF40B-212ENST00000551111 EFCAB14O75071 495 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 SMARCA1P28370 1054 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 KIF5BP33176 963 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 TCF7P36402 384 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 AAK1Q2M2I8 961 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 EPC2Q52LR7 807 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 FAM26DQ5JW98 314 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 MARCH8Q5T0T0 291 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 SEPT8Q92599 483 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 CUL5Q93034 780 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 PGBD1Q96JS3 809 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 PCYT2Q99447 389 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 SENP7Q9BQF6 1050 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 PSTPIP2Q9H939 334 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 UBIAD1Q9Y5Z9 338 aa13.29□□□□□ -0.28
PRPF40B-212ENST00000551111 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 AMHP03971 560 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 GHRP10912 638 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 LIFRP42702 1097 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 MGAT3Q09327 533 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 MICU3Q86XE3 530 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 FANCBQ8NB91 859 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 TMEM87BQ96K49 555 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 LMCD1Q9NZU5 365 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 PCDHA6Q9UN73 950 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 PCDHA8Q9Y5H6 950 aa13.28□□□□□ -0.28
PRPF40B-212ENST00000551111 PLXNA4Q9HCM2 1894 aa13.27□□□□□ -0.28
PRPF40B-212ENST00000551111 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 LINC00271P0C7V0 271 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 LPIN1Q14693 890 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 DNAJB3Q8WWF6 145 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 GPRASP2Q96D09 838 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 MTA3Q9BTC8 594 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 IFIH1Q9BYX4 1025 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 UBE2ZQ9H832 354 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 EHMT1Q9H9B1 1298 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 BRPF3Q9ULD4 1205 aa13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 FNDC1Q4ZHG4 1894 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-212ENST00000551111 TRIOO75962 3097 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 ARP10275 920 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 KCNA5P22460 613 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 GNAQP50148 359 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 IGBP1P78318 339 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 FUT2Q10981 343 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 PPFIA1Q13136 1202 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 GRIK4Q16099 956 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 ADCK5Q3MIX3 580 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 WWC2Q6AWC2 1192 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 XRRA1Q6P2D8 792 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 NLRX1Q86UT6 975 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 TMEM192Q8IY95 271 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 LINC01599Q8WXQ3 324 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 SEPT1Q8WYJ6 367 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 NRCAMQ92823 1304 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 MRPL38Q96DV4 380 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 UIMC1Q96RL1 719 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 YME1L1Q96TA2 773 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 AGO3Q9H9G7 860 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 C11orf16Q9NQ32 467 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 JADE2Q9NQC1 790 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 SLC12A7Q9Y666 1083 aa13.26□□□□□ -0.29
PRPF40B-212ENST00000551111 MBLAC1A4D2B0 266 aaPredicted RBP13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 H3BNC9 293 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 ENPP3O14638 875 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 CAND2O75155 1236 aa13.25□□□□□ -0.29
PRPF40B-212ENST00000551111 GNAT1P11488 350 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms