RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 H0YCG3 227 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 FBXO33Q7Z6M2 555 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 SREK1Q8WXA9 508 aaKnown RBP18.1■□□□□ 0.49
TCOF1-206ENST00000445265 TMEM206Q9H813 350 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 CNOT10Q9H9A5 744 aaKnown RBP18.1■□□□□ 0.49
TCOF1-206ENST00000445265 E9PMD0 336 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 TDP2O95551 362 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 KRT15P19012 456 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 MRPS25P82663 173 aaKnown RBP18.1■□□□□ 0.49
TCOF1-206ENST00000445265 NAALADL2Q58DX5 795 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 DCAF4Q8WV16 495 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 TTLL12Q14166 644 aaPredicted RBP18.1■□□□□ 0.49
TCOF1-206ENST00000445265 FOXP4Q8IVH2 680 aaPredicted RBP18.1■□□□□ 0.49
TCOF1-206ENST00000445265 GSPT2Q8IYD1 628 aaKnown RBP18.1■□□□□ 0.49
TCOF1-206ENST00000445265 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 ADCY8P40145 1251 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 HHATQ5VTY9 493 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 SPICE1Q8N0Z3 855 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 ANKRD42Q8N9B4 389 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 BBOF1Q8ND07 529 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 AGPAT5Q9NUQ2 364 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 BAIAP2L1Q9UHR4 511 aa18.1■□□□□ 0.49
TCOF1-206ENST00000445265 MAN1A1P33908 653 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 STK4Q13043 487 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 NT5C1BQ96P26 610 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 ACCSQ96QU6 501 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 INTS9Q9NV88 658 aaKnown RBP18.09■□□□□ 0.49
TCOF1-206ENST00000445265 VGLL3A8MV65 326 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 BUB1BO60566 1050 aaPredicted RBP18.09■□□□□ 0.49
TCOF1-206ENST00000445265 PLTPP55058 493 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 PAF1Q8N7H5 531 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 MGARPQ8TDB4 240 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 FAM20AQ96MK3 541 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 FMO2Q99518 471 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 SSU72P8A0A1W2PR75 194 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 ALAS1P13196 640 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 SEC23AQ15436 765 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 CSRNP1Q96S65 589 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 PSD3Q9NYI0 1048 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 FHOD1Q9Y613 1164 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 LRRN2O75325 713 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 CD44P16070 742 aaKnown RBP18.09■□□□□ 0.49
TCOF1-206ENST00000445265 TSNARE1Q96NA8 513 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 AP1M1Q9BXS5 423 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 PICK1Q9NRD5 415 aa18.09■□□□□ 0.49
TCOF1-206ENST00000445265 DIS3Q9Y2L1 958 aaKnown RBP18.09■□□□□ 0.49
TCOF1-206ENST00000445265 TCRBV5S4A2TA0A5A2 114 aa18.08■□□□□ 0.49
TCOF1-206ENST00000445265 CDKAL1Q5VV42 579 aa18.08■□□□□ 0.49
TCOF1-206ENST00000445265 CC2D2BQ6DHV5 1058 aa18.08■□□□□ 0.49
TCOF1-206ENST00000445265 TBC1D8O95759 1140 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 BPIFB4P59827 614 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 DMP1Q13316 513 aaPredicted RBP18.08■□□□□ 0.48
TCOF1-206ENST00000445265 NT5DC1Q5TFE4 455 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 DPH6Q7L8W6 267 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 SFR1Q86XK3 245 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 CCDC197Q8NCU1 140 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 UHMK1Q8TAS1 419 aaKnown RBP18.08■□□□□ 0.48
TCOF1-206ENST00000445265 P3H4Q92791 437 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 A0A1W2PQJ5 194 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 STXBP3O00186 592 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 THAP12O43422 761 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 GDF11O95390 407 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 PLA2G4AP47712 749 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 NAA25Q14CX7 972 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 UAP1Q16222 522 aaPredicted RBP18.08■□□□□ 0.48
TCOF1-206ENST00000445265 TMEM179Q6ZVK1 233 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 RHOT2Q8IXI1 618 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 NEK9Q8TD19 979 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 KLHL14Q9P2G3 628 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 CCPG1Q9ULG6 757 aa18.08■□□□□ 0.48
TCOF1-206ENST00000445265 POTEB3A0JP26 581 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 POTECB2RU33 542 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 NR3C1P04150 777 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 STAT2P52630 851 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 KNOP1Q1ED39 458 aaKnown RBP18.07■□□□□ 0.48
TCOF1-206ENST00000445265 POTEBQ6S5H4 581 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 CCDC63Q8NA47 563 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.07■□□□□ 0.48
TCOF1-206ENST00000445265 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 TESPA1A2RU30 521 aaPredicted RBP18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L15C9J2P7 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L13C9JLJ4 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L11C9JVI0 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L18D6R9N7 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L22D6RA61 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L17D6RBQ6 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L19D6RCP7 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L20D6RJB6 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 NCK2O43639 380 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L24Q0WX57 530 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 PDCLQ13371 301 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 USP17L6PQ6QN14 398 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 TMEM60Q9H2L4 133 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 PLAAQ9Y263 795 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 FAM237AA0A1B0GTK4 181 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 TCP10L2B9ZVM9 353 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 SARSP49591 514 aaKnown RBP18.07■□□□□ 0.48
TCOF1-206ENST00000445265 CDAN1Q8IWY9 1227 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 ZMYND12Q9H0C1 365 aa18.07■□□□□ 0.48
TCOF1-206ENST00000445265 MYO1FO00160 1098 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms