RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 LGSNQ5TDP6 509 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 CPLX4Q7Z7G2 160 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 GJA10Q969M2 543 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 NHEJ1Q9H9Q4 299 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-208ENST00000430669 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 ATRNO75882 1429 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 NMT2O60551 498 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 SRGAP1Q7Z6B7 1085 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 CCDC117Q8IWD4 279 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-208ENST00000430669 DESI2Q9BSY9 194 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 FAM204AQ9H8W3 233 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 KCNK3O14649 394 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 CCDC121Q6ZUS5 278 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 C17orf53Q8N3J3 647 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-208ENST00000430669 ASIC3Q9UHC3 531 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 ZNRF3Q9ULT6 936 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
PTCH1-208ENST00000430669 LONRF2Q1L5Z9 754 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 SELENOSQ9BQE4 189 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 ARHGEF37A1IGU5 675 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 CEP170P1Q96L14 293 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 MKRN1Q9UHC7 482 aaKnown RBP12.57□□□□□ -0.4
PTCH1-208ENST00000430669 RSPH3Q86UC2 560 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 MB21D1Q8N884 522 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 PAIP2Q9BPZ3 127 aaKnown RBP12.57□□□□□ -0.4
PTCH1-208ENST00000430669 RAB20Q9NX57 234 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-208ENST00000430669 DLATP10515 647 aaKnown RBP12.57□□□□□ -0.4
PTCH1-208ENST00000430669 ZNF354CQ86Y25 554 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 GRAMD1CQ8IYS0 662 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 KAZALD1Q96I82 304 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 ANKFY1Q9P2R3 1169 aa12.57□□□□□ -0.4
PTCH1-208ENST00000430669 GOLGA8KD6RF30 607 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 TBX3O15119 743 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 DAPK3O43293 454 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 NDUFA10O95299 355 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 NSFP46459 744 aaKnown RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 ARHGAP4P98171 946 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 PRKG1Q13976 671 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 SRBD1Q8N5C6 995 aaKnown RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 PRPF38AQ8NAV1 312 aaKnown RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 ATRIPQ8WXE1 791 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 CEP72Q9P209 647 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 SARNPP82979 210 aaKnown RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 SMAP1Q8IYB5 467 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 MRPL47Q9HD33 250 aaKnown RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 A0A1W2PQC6 194 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 MFAP3LO75121 409 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 POTEDQ86YR6 584 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 PPM1KQ8N3J5 372 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 GPR101Q96P66 508 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 SAMSN1Q9NSI8 373 aaKnown RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 F5H6K3 240 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 KLRC3Q07444 240 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 RDH13Q8NBN7 331 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 DAGLBQ8NCG7 672 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 RUBCNQ92622 972 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 CHAMP1Q96JM3 812 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 ZNF277Q9NRM2 450 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-208ENST00000430669 TAF12Q16514 161 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 ABHD10Q9NUJ1 306 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 CUL4BQ13620 913 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 TRERF1Q96PN7 1200 aa12.56□□□□□ -0.4
PTCH1-208ENST00000430669 GTF3C2Q8WUA4 911 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 RMDN3Q96TC7 470 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 COMMD10Q9Y6G5 202 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 ZNF543Q08ER8 600 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 RSBN1LQ6PCB5 846 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 SND1Q7KZF4 910 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 FBXO2Q9UK22 296 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 FAM169AQ9Y6X4 670 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 SEPT14Q6ZU15 432 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 GUF1Q8N442 669 aaKnown RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 SLC16A10Q8TF71 515 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 UIMC1Q96RL1 719 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 VPS33BQ9H267 617 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 STXBP2Q15833 593 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 RSAD2Q8WXG1 361 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 ESYT2A0FGR8 921 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 FYB2Q5VWT5 728 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 SPATS2Q86XZ4 545 aaKnown RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 TRIM7Q9C029 511 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 PRDM10Q9NQV6 1147 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 NRBP1Q9UHY1 535 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 DDX41Q9UJV9 622 aaKnown RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 DAGLAQ9Y4D2 1042 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 TLR3O15455 904 aaKnown RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 FGFR2P21802 821 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 HOXA13P31271 388 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-208ENST00000430669 KYAT1Q16773 422 aa12.55□□□□□ -0.4
PTCH1-208ENST00000430669 RINT1Q6NUQ1 792 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms