RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 PSMC6P62333 389 aa29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 KRT76Q01546 638 aa29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 CTTNQ14247 550 aaKnown RBP29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 GPBP1Q86WP2 473 aa29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 MMP19Q99542 508 aa29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 GDAQ9Y2T3 454 aa29.34■■■□□ 2.29
ATPAF1-202ENST00000371937 ATP9AO75110 1047 aa29.33■■■□□ 2.29
ATPAF1-202ENST00000371937 EYA4O95677 639 aa29.33■■■□□ 2.29
ATPAF1-202ENST00000371937 FCER1AP12319 257 aa29.33■■■□□ 2.29
ATPAF1-202ENST00000371937 TRIM44Q96DX7 344 aaPredicted RBP29.33■■■□□ 2.29
ATPAF1-202ENST00000371937 NACC1Q96RE7 527 aa29.33■■■□□ 2.29
ATPAF1-202ENST00000371937 PARK7Q99497 189 aaKnown RBP29.33■■■□□ 2.29
ATPAF1-202ENST00000371937 SYNRGQ9UMZ2 1314 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 RGS20O76081 388 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 SFNP31947 248 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 PRCPP42785 496 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 ZNF157P51786 506 aaPredicted RBP29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 ZNF75DP51815 510 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 JAK3P52333 1124 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 PSMD2Q13200 908 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 ADSSL1Q8N142 457 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 FAM43AQ8N2R8 423 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 DNAJC19Q96DA6 116 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 RWDD2AQ9UIY3 292 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 NFE2L3Q9Y4A8 694 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 ASTN1O14525 1302 aa29.32■■■□□ 2.28
ATPAF1-202ENST00000371937 SOWAHBA6NEL2 793 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 P4HBP07237 508 aaKnown RBP29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 IDEP14735 1019 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 CYP11B2P19099 503 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 PAK1Q13153 545 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 SPATA1Q5VX52 437 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 HSD3B7Q9H2F3 369 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 FANCLQ9NW38 375 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 SAMM50Q9Y512 469 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 SPATA31C2B4DYI2 1134 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 EDNRBP24530 442 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 WDR78Q5VTH9 848 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 TRMT44Q8IYL2 757 aaKnown RBP29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 RDM1Q8NG50 284 aa29.31■■■□□ 2.28
ATPAF1-202ENST00000371937 NFASCO94856 1347 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 WDR64B1ANS9 1081 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 KRT18P05783 430 aaKnown RBP29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 COBLL1Q53SF7 1204 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 ZNF746Q6NUN9 644 aaPredicted RBP29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 SAPCD2Q86UD0 394 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 CCDC65Q8IXS2 484 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 MED15Q96RN5 788 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 LXNQ9BS40 222 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 BHMT2Q9H2M3 363 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 GPBP1L1Q9HC44 474 aaPredicted RBP29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 MORF4L1Q9UBU8 362 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 CTNND2Q9UQB3 1225 aa29.3■■■□□ 2.28
ATPAF1-202ENST00000371937 PSMA7O14818 248 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 ICAM3P32942 547 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 RASAL3Q86YV0 1011 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 ANKRD13CQ8N6S4 541 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 PTPN18Q99952 460 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 SENP7Q9BQF6 1050 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 R3HDMLQ9H3Y0 253 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 ZSWIM4Q9H7M6 989 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 PASKQ96RG2 1323 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 DNAJC25-GNG10A0A024R161 153 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 KCNA2P16389 499 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 STK4Q13043 487 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 NELFBQ8WX92 580 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 MRFAP1L1Q96HT8 127 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 DHTKD1Q96HY7 919 aaPredicted RBP29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 PANK4Q9NVE7 773 aa29.29■■■□□ 2.28
ATPAF1-202ENST00000371937 MANSC4A6NHS7 340 aaPredicted RBP29.28■■■□□ 2.28
ATPAF1-202ENST00000371937 ARSHQ5FYA8 562 aa29.28■■■□□ 2.28
ATPAF1-202ENST00000371937 RGMBQ6NW40 437 aa29.28■■■□□ 2.28
ATPAF1-202ENST00000371937 BANK1Q8NDB2 785 aa29.28■■■□□ 2.28
ATPAF1-202ENST00000371937 PORCNQ9H237 461 aa29.28■■■□□ 2.28
ATPAF1-202ENST00000371937 MAPK8IP1Q9UQF2 711 aa29.28■■■□□ 2.28
ATPAF1-202ENST00000371937 LOC102724159A0A0B4J2E5 919 aa29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 QARSP47897 775 aaKnown RBP29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 STX17P56962 302 aa29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 EHHADHQ08426 723 aa29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 PWP2Q15269 919 aaKnown RBP29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 SMAP1Q8IYB5 467 aaPredicted RBP29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 PIGOQ8TEQ8 1089 aa29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 PGK2P07205 417 aa29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 CDC25BP30305 580 aa29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 TPD52L1Q16890 204 aaPredicted RBP29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 EFCC1Q9HA90 598 aa29.27■■■□□ 2.28
ATPAF1-202ENST00000371937 COASYQ13057 564 aa29.26■■■□□ 2.27
ATPAF1-202ENST00000371937 JPH1Q9HDC5 661 aaPredicted RBP29.26■■■□□ 2.27
ATPAF1-202ENST00000371937 ZCCHC17Q9NP64 241 aaKnown RBP29.26■■■□□ 2.27
ATPAF1-202ENST00000371937 KCND2Q9NZV8 630 aa29.26■■■□□ 2.27
ATPAF1-202ENST00000371937 KIAA1217Q5T5P2 1943 aa29.26■■■□□ 2.27
ATPAF1-202ENST00000371937 LYPLA2O95372 231 aa29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 CCNE2O96020 404 aa29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 PTMAP06454 111 aaKnown RBP29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 ATP1A3P13637 1013 aa29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 ZNF18P17022 549 aa29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 CDK11BP21127 795 aaKnown RBP29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 FANCCQ00597 558 aa29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 FSTL1Q12841 308 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms