RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZNF18P17022 549 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 KCNA1Q09470 495 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 SYT2Q8N9I0 419 aaPredicted RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 TDRD7Q8NHU6 1098 aaKnown RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 FAM167BQ9BTA0 163 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 RGS12O14924 1447 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 UHRF1BP1LA0JNW5 1464 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 CCDC85BQ15834 202 aaPredicted RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 TBC1D22AQ8WUA7 517 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 UPF3AQ9H1J1 476 aaKnown RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 GOLGA8MH3BSY2 632 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 INO80B-WBP1J3KQ70 363 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 ATP8B1O43520 1251 aa17.28■□□□□ 0.36
COL18A1-203ENST00000359759 INO80BQ9C086 356 aaPredicted RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 PPARGC1AQ9UBK2 798 aaKnown RBP17.28■□□□□ 0.36
COL18A1-203ENST00000359759 E2F6O75461 281 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 PMLP29590 882 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 TFDP1Q14186 410 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 BEND6Q5SZJ8 279 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-203ENST00000359759 RNF207Q6ZRF8 634 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 KRT26Q7Z3Y9 468 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 NR1H4Q96RI1 486 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-203ENST00000359759 MTRQ99707 1265 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 CCDC90BQ9GZT6 254 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 CHL1O00533 1208 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 RAP1GDS1P52306 607 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 MAN2A1Q16706 1144 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 FAF2Q96CS3 445 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 MLXIPLQ9NP71 852 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 PRPSAP2O60256 369 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 PPP6R2O75170 966 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 CYP27A1Q02318 531 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 SMAD1Q15797 465 aaKnown RBP17.27■□□□□ 0.36
COL18A1-203ENST00000359759 FAM8A1Q9UBU6 413 aa17.27■□□□□ 0.36
COL18A1-203ENST00000359759 TSR3Q9UJK0 312 aaKnown RBP17.27■□□□□ 0.36
COL18A1-203ENST00000359759 GOLGA8IPA6NC78 632 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 GOLGA8JA6NMD2 632 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 HMGB1P1B2RPK0 211 aaPredicted RBP17.27■□□□□ 0.35
COL18A1-203ENST00000359759 GYG2O15488 501 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 SRGAP2O75044 1071 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 HADHAP40939 763 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 PMS1P54277 932 aaKnown RBP17.27■□□□□ 0.35
COL18A1-203ENST00000359759 CRLF3Q8IUI8 442 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 GIPC2Q8TF65 315 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 EAF2Q96CJ1 260 aaPredicted RBP17.27■□□□□ 0.35
COL18A1-203ENST00000359759 SLC5A4Q9NY91 659 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 MAPKBP1O60336 1514 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.35
COL18A1-203ENST00000359759 SLFN14P0C7P3 912 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 GALNT17Q6IS24 598 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 STK17AQ9UEE5 414 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 ITM2BQ9Y287 266 aa17.27■□□□□ 0.35
COL18A1-203ENST00000359759 IQANK1A0A1B0GTG1 560 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 MAN1A2O60476 641 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 MMEP08473 750 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 METTL23Q86XA0 190 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 DHTKD1Q96HY7 919 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-203ENST00000359759 HEXIM2Q96MH2 286 aaKnown RBP17.26■□□□□ 0.35
COL18A1-203ENST00000359759 PITPNM3Q9BZ71 974 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 SERPING1P05155 500 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 ADORA1P30542 326 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 KPNA2P52292 529 aaKnown RBP17.26■□□□□ 0.35
COL18A1-203ENST00000359759 PDCLQ13371 301 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 KRT33BQ14525 404 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 FAM47EQ6ZV65 393 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 SAYSD1Q9NPB0 183 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 CUL7Q14999 1698 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 KCNQ3O43525 872 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 EPHB1P54762 984 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 OCA2Q04671 838 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 TMPRSS15P98073 1019 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 NOP53Q9NZM5 478 aaKnown RBP17.26■□□□□ 0.35
COL18A1-203ENST00000359759 ATP2B4P23634 1241 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 ZC3H12BQ5HYM0 836 aaKnown RBP17.26■□□□□ 0.35
COL18A1-203ENST00000359759 ALS2CLQ60I27 953 aa17.26■□□□□ 0.35
COL18A1-203ENST00000359759 ZNF710Q8N1W2 664 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 ABCB5Q2M3G0 1257 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 KLC3Q6P597 504 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 COG4Q9H9E3 785 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 HSPA8P11142 646 aaKnown RBP17.25■□□□□ 0.35
COL18A1-203ENST00000359759 RWDD4Q6NW29 188 aaKnown RBP17.25■□□□□ 0.35
COL18A1-203ENST00000359759 DACH2Q96NX9 599 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 SUGT1Q9Y2Z0 365 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
COL18A1-203ENST00000359759 C6orf118Q5T5N4 469 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 FBXO38Q6PIJ6 1188 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 GSDMAQ96QA5 445 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 ING2Q9H160 280 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 C1orf146Q5VVC0 180 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 ABI1Q8IZP0 508 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 GTSE1Q9NYZ3 720 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 L3MBTL1Q9Y468 752 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 SSH2Q76I76 1423 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 CHEK2O96017 543 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 RPS8P62241 208 aaKnown RBP17.25■□□□□ 0.35
COL18A1-203ENST00000359759 ACTN3Q08043 901 aaPredicted RBP17.25■□□□□ 0.35
COL18A1-203ENST00000359759 SNX19Q92543 992 aa17.25■□□□□ 0.35
COL18A1-203ENST00000359759 TTC1Q99614 292 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms