RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 LIN37Q96GY3 246 aaPredicted RBP6.25□□□□□ -1.41
CCDC54-201ENST00000261058 IFT22Q9H7X7 185 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.25□□□□□ -1.41
CCDC54-201ENST00000261058 MCM8Q9UJA3 840 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 ATP23Q9Y6H3 246 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 FAM90A27PA6NNH2 459 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 GPR39O43194 453 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 LTFP02788 710 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 CPEP16870 476 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 PTPN1P18031 435 aaKnown RBP6.25□□□□□ -1.41
CCDC54-201ENST00000261058 CDK11BP21127 795 aaKnown RBP6.25□□□□□ -1.41
CCDC54-201ENST00000261058 PMLP29590 882 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 VIPR1P32241 457 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 IGBP1P78318 339 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 STAT4Q14765 748 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 RBM12BQ8IXT5 1001 aaKnown RBP6.25□□□□□ -1.41
CCDC54-201ENST00000261058 EFHBQ8N7U6 833 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 FMNL2Q96PY5 1086 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 TTC1Q99614 292 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 OXSMQ9NWU1 459 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 APOBEC2Q9Y235 224 aaKnown RBP6.25□□□□□ -1.41
CCDC54-201ENST00000261058 ZKSCAN5Q9Y2L8 839 aa6.25□□□□□ -1.41
CCDC54-201ENST00000261058 ACOT7O00154 380 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 KCNK3O14649 394 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 FKBP9O95302 570 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 C4BPAP04003 597 aaKnown RBP6.24□□□□□ -1.41
CCDC54-201ENST00000261058 SDHAP31040 664 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 OLFML2BQ68BL8 750 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 CC2D1AQ6P1N0 951 aaPredicted RBP6.24□□□□□ -1.41
CCDC54-201ENST00000261058 LHFPL2Q6ZUX7 228 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 FKBP9P1Q75LS8 142 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 AMIGO3Q86WK7 504 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 FAM126BQ8IXS8 530 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 CHTF18Q8WVB6 975 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 CPA5Q8WXQ8 436 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 USP7Q93009 1102 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 KCNH7Q9NS40 1196 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 TYW1Q9NV66 732 aaKnown RBP6.24□□□□□ -1.41
CCDC54-201ENST00000261058 FAM53CQ9NYF3 392 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 SPO11Q9Y5K1 396 aa6.24□□□□□ -1.41
CCDC54-201ENST00000261058 MYOCOSA0A1B0GUC4 107 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 TGM5O43548 720 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 BUB1BO60566 1050 aaPredicted RBP6.23□□□□□ -1.41
CCDC54-201ENST00000261058 ID4P47928 161 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 OCRLQ01968 901 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 RNF219Q5W0B1 726 aaPredicted RBP6.23□□□□□ -1.41
CCDC54-201ENST00000261058 CPZQ66K79 652 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 TMC6Q7Z403 805 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 NECAB2Q7Z6G3 386 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 STAG1Q8WVM7 1258 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 RNF38Q9H0F5 515 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 EMC7Q9NPA0 242 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 SPTLC3Q9NUV7 552 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 THG1LQ9NWX6 298 aaKnown RBP6.23□□□□□ -1.41
CCDC54-201ENST00000261058 DTLQ9NZJ0 730 aa6.23□□□□□ -1.41
CCDC54-201ENST00000261058 H2AFY2Q9P0M6 372 aaPredicted RBP6.23□□□□□ -1.41
CCDC54-201ENST00000261058 DBR1Q9UK59 544 aaKnown RBP6.23□□□□□ -1.41
CCDC54-201ENST00000261058 H7C1D1 291 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 LRG1P02750 347 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 ASGR2P07307 311 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 FAHP16930 419 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 TAL1P17542 331 aaPredicted RBP6.22□□□□□ -1.41
CCDC54-201ENST00000261058 ANAPC15P60006 121 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 HERVK_113P62684 666 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 PHC1P78364 1004 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 SART3Q15020 963 aaKnown RBP6.22□□□□□ -1.41
CCDC54-201ENST00000261058 PAN2Q504Q3 1202 aaKnown RBP6.22□□□□□ -1.41
CCDC54-201ENST00000261058 ETV3LQ6ZN32 361 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 PRR23BQ6ZRT6 265 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 ZNF605Q86T29 641 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 WDR66Q8TBY9 1149 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 SCYL1Q96KG9 808 aa6.22□□□□□ -1.41
CCDC54-201ENST00000261058 MBD1Q9UIS9 605 aaPredicted RBP6.22□□□□□ -1.41
CCDC54-201ENST00000261058 TEX51A0A1B0GUA7 166 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 ALG1L2C9J202 215 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 K7ESF4 209 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 SCDO00767 359 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 KPNA1P52294 538 aaPredicted RBP6.21□□□□□ -1.42
CCDC54-201ENST00000261058 IL2P60568 153 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 SMAD3P84022 425 aaKnown RBP6.21□□□□□ -1.42
CCDC54-201ENST00000261058 ZNF200P98182 395 aaPredicted RBP6.21□□□□□ -1.42
CCDC54-201ENST00000261058 SMAD2Q15796 467 aaKnown RBP6.21□□□□□ -1.42
CCDC54-201ENST00000261058 CR1LQ2VPA4 569 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 CATSPEREQ5SY80 951 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 GPR158Q5T848 1215 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 BTBD8Q5XKL5 378 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 MPZL3Q6UWV2 235 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 PROSER1Q86XN7 944 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 SPATS2Q86XZ4 545 aaKnown RBP6.21□□□□□ -1.42
CCDC54-201ENST00000261058 KIAA1958Q8N8K9 716 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 ATL2Q8NHH9 583 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 ALG3Q92685 438 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 GPR101Q96P66 508 aaPredicted RBP6.21□□□□□ -1.42
CCDC54-201ENST00000261058 ELF4Q99607 663 aaPredicted RBP6.21□□□□□ -1.42
CCDC54-201ENST00000261058 MCOLN1Q9GZU1 580 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 BCAS3Q9H6U6 928 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 CNTD2Q9H8S5 307 aa6.21□□□□□ -1.42
CCDC54-201ENST00000261058 ACSS2Q9NR19 701 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms