RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	TTC3	P53804	2025 aa		24.37	■■□□□ 1.49
NECAB3-222	ENST00000607805		H3BRB1	525 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	LGALS2	P05162	132 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	GSPT1	P15170	499 aa	Known RBP	24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	TRAF1	Q13077	416 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	SEMA3F	Q13275	785 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	FAM117B	Q6P1L5	589 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	HOMER1	Q86YM7	354 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	INPP4A	Q96PE3	977 aa	Predicted RBP	24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	OSBPL7	Q9BZF2	842 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	RNPEP	Q9H4A4	650 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	TUT1	Q9H6E5	874 aa	Known RBP	24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	INSL6	Q9Y581	213 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	TAF6L	Q9Y6J9	622 aa		24.36	■■□□□ 1.49
NECAB3-222	ENST00000607805	PNMA6F	A0A0J9YX94	578 aa		24.35	■■□□□ 1.49
NECAB3-222	ENST00000607805	C17orf102	A2RUQ5	167 aa		24.35	■■□□□ 1.49
NECAB3-222	ENST00000607805	PDE4A	P27815	886 aa		24.35	■■□□□ 1.49
NECAB3-222	ENST00000607805	THPO	P40225	353 aa		24.35	■■□□□ 1.49
NECAB3-222	ENST00000607805	PTH1R	Q03431	593 aa		24.35	■■□□□ 1.49
NECAB3-222	ENST00000607805	FCHSD1	Q86WN1	690 aa		24.35	■■□□□ 1.49
NECAB3-222	ENST00000607805	KHSRP	Q92945	711 aa	Known RBP eCLIP	24.35	■■□□□ 1.49
NECAB3-222	ENST00000607805	MLXIP	Q9HAP2	919 aa		24.35	■■□□□ 1.49
NECAB3-222	ENST00000607805	TREH	O43280	583 aa		24.34	■■□□□ 1.49
NECAB3-222	ENST00000607805	SMIM10L2A	P0DMW4	78 aa		24.34	■■□□□ 1.49
NECAB3-222	ENST00000607805	SMIM10L2B	P0DMW5	78 aa		24.34	■■□□□ 1.49
NECAB3-222	ENST00000607805	PLA2G5	P39877	138 aa		24.34	■■□□□ 1.49
NECAB3-222	ENST00000607805	ATP6V0A1	Q93050	837 aa		24.34	■■□□□ 1.49
NECAB3-222	ENST00000607805	C17orf80	Q9BSJ5	609 aa		24.34	■■□□□ 1.49
NECAB3-222	ENST00000607805	UBE2Z	Q9H832	354 aa	Predicted RBP	24.34	■■□□□ 1.49
NECAB3-222	ENST00000607805	SPATA31C2	B4DYI2	1134 aa		24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	IFIT3	O14879	490 aa	Known RBP	24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	STAM2	O75886	525 aa		24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	ADAM17	P78536	824 aa		24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	TRDN	Q13061	729 aa		24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	TTC22	Q5TAA0	569 aa		24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	LRFN3	Q9BTN0	628 aa		24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	USP26	Q9BXU7	913 aa		24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	CD320	Q9NPF0	282 aa		24.33	■■□□□ 1.49
NECAB3-222	ENST00000607805	CAND2	O75155	1236 aa		24.32	■■□□□ 1.48
NECAB3-222	ENST00000607805	AMH	P03971	560 aa		24.32	■■□□□ 1.48
NECAB3-222	ENST00000607805	METTL7B	Q6UX53	244 aa		24.32	■■□□□ 1.48
NECAB3-222	ENST00000607805	GPR20	Q99678	358 aa		24.32	■■□□□ 1.48
NECAB3-222	ENST00000607805		U3KPZ7	1027 aa	Predicted RBP	24.32	■■□□□ 1.48
NECAB3-222	ENST00000607805	ANTXR2	P58335	489 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	NEDD9	Q14511	834 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	GNPTAB	Q3T906	1256 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	MYOCD	Q8IZQ8	938 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	FBXO22	Q8NEZ5	403 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	IGDCC4	Q8TDY8	1250 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	TOP1MT	Q969P6	601 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	C11orf16	Q9NQ32	467 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	TELO2	Q9Y4R8	837 aa		24.31	■■□□□ 1.48
NECAB3-222	ENST00000607805	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	24.3	■■□□□ 1.48
NECAB3-222	ENST00000607805		E7EWF7	191 aa		24.3	■■□□□ 1.48
NECAB3-222	ENST00000607805	CHML	P26374	656 aa		24.3	■■□□□ 1.48
NECAB3-222	ENST00000607805	WTAP	Q15007	396 aa		24.3	■■□□□ 1.48
NECAB3-222	ENST00000607805	LEXM	Q3ZCV2	418 aa		24.3	■■□□□ 1.48
NECAB3-222	ENST00000607805	CYFIP1	Q7L576	1253 aa		24.3	■■□□□ 1.48
NECAB3-222	ENST00000607805	ARIH1	Q9Y4X5	557 aa	Predicted RBP	24.3	■■□□□ 1.48
NECAB3-222	ENST00000607805	FAM26D	Q5JW98	314 aa		24.29	■■□□□ 1.48
NECAB3-222	ENST00000607805	NCOA7	Q8NI08	942 aa		24.29	■■□□□ 1.48
NECAB3-222	ENST00000607805	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	24.29	■■□□□ 1.48
NECAB3-222	ENST00000607805	SEPT8	Q92599	483 aa		24.29	■■□□□ 1.48
NECAB3-222	ENST00000607805	MRPL38	Q96DV4	380 aa	Known RBP	24.29	■■□□□ 1.48
NECAB3-222	ENST00000607805	SENP7	Q9BQF6	1050 aa		24.29	■■□□□ 1.48
NECAB3-222	ENST00000607805	SETD4	Q9NVD3	440 aa		24.29	■■□□□ 1.48
NECAB3-222	ENST00000607805	KIAA1671	Q9BY89	1806 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	ERICH2	A1L162	156 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	NOP56	O00567	594 aa	Known RBP	24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	FIBP	O43427	364 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	GPR37L1	O60883	481 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	EPC2	Q52LR7	807 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	TRIM50	Q86XT4	487 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	MB21D2	Q8IYB1	491 aa	Predicted RBP	24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	SAMD11	Q96NU1	681 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	MAP3K14	Q99558	947 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	SPZ1	Q9BXG8	430 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	WDFY4	Q6ZS81	3184 aa		24.28	■■□□□ 1.48
NECAB3-222	ENST00000607805	PIK3CD	O00329	1044 aa		24.27	■■□□□ 1.48
NECAB3-222	ENST00000607805	MEIS2	O14770	477 aa		24.27	■■□□□ 1.48
NECAB3-222	ENST00000607805	PCNX4	Q63HM2	1172 aa		24.27	■■□□□ 1.48
NECAB3-222	ENST00000607805	FAM178B	Q8IXR5	827 aa		24.27	■■□□□ 1.48
NECAB3-222	ENST00000607805	RUFY2	Q8WXA3	655 aa		24.27	■■□□□ 1.48
NECAB3-222	ENST00000607805	FAM122A	Q96E09	287 aa		24.27	■■□□□ 1.48
NECAB3-222	ENST00000607805	RTEL1	Q9NZ71	1219 aa		24.27	■■□□□ 1.48
NECAB3-222	ENST00000607805	PI4K2B	G5E9Z4	385 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805		H3BNC9	293 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	SGSM2	O43147	1006 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	CTSH	P09668	335 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	GNAT1	P11488	350 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	SMARCA1	P28370	1054 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	COL19A1	Q14993	1142 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	SART3	Q15020	963 aa	Known RBP	24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	TMEM31	Q5JXX7	168 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	XRRA1	Q6P2D8	792 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	USP17L6P	Q6QN14	398 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	CATIP	Q7Z7H3	387 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	RALYL	Q86SE5	291 aa	Known RBP	24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	NEK9	Q8TD19	979 aa		24.26	■■□□□ 1.47
NECAB3-222	ENST00000607805	LMBR1	Q8WVP7	490 aa		24.26	■■□□□ 1.47

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms