RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 C12orf49Q9H741 205 aa6.61□□□□□ -1.35
LSM1P2-201ENST00000604911 ZNF304Q9HCX3 659 aa6.61□□□□□ -1.35
LSM1P2-201ENST00000604911 LUC7LQ9NQ29 371 aaKnown RBP6.61□□□□□ -1.35
LSM1P2-201ENST00000604911 ZKSCAN5Q9Y2L8 839 aa6.61□□□□□ -1.35
LSM1P2-201ENST00000604911 COL4A3BPQ9Y5P4 624 aa6.61□□□□□ -1.35
LSM1P2-201ENST00000604911 GOLGA6L10A6NI86 522 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 FAM155AB1AL88 458 aaPredicted RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 IFRD1O00458 451 aaPredicted RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 VIL1P09327 827 aaKnown RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 MAPK8P45983 427 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 NEDD9Q14511 834 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 ZRSR1Q15695 479 aaKnown RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 TMEM67Q5HYA8 995 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 CDKAL1Q5VV42 579 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 CCSAPQ6IQ19 270 aaPredicted RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 PDXDC1Q6P996 788 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 SYDE1Q6ZW31 735 aaPredicted RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 HDXQ7Z353 690 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 SRLQ86TD4 932 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 TMEM110Q86TL2 294 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 IQUBQ8NA54 791 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 SLC43A3Q8NBI5 491 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 APPL2Q8NEU8 664 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 BICD2Q8TD16 824 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 JARID2Q92833 1246 aaPredicted RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 ZNF496Q96IT1 587 aaPredicted RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 PAWRQ96IZ0 340 aaKnown RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 SPAG5Q96R06 1193 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 MIPEPQ99797 713 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 CAPS2Q9BXY5 557 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 SLC7A5P2Q9GIP4 190 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 VCX3BQ9H321 246 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 FAM8A1Q9UBU6 413 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 TBX22Q9Y458 520 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 SNCAIPQ9Y6H5 919 aa6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 V9GYY5 206 aaPredicted RBP6.6□□□□□ -1.35
LSM1P2-201ENST00000604911 H3BS24 57 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 RBAK-RBAKDNI3L0D1 243 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 CPLX1O14810 134 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 CLASP2O75122 1294 aaKnown RBP6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 RTN3O95197 1032 aaPredicted RBP6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 TSPY4P0CV99 314 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 TSPY10P0CW01 314 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 CDK8P49336 464 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 ADCY1Q08828 1119 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 RAPGEF1Q13905 1077 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 VPS72Q15906 364 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 SKOR2Q2VWA4 1001 aaPredicted RBP6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 GNPTABQ3T906 1256 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 BOLA3Q53S33 107 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 AKNAD1Q5T1N1 836 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 LETMD1Q6P1Q0 360 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 SV2BQ7L1I2 683 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 ARMC9Q7Z3E5 817 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 SAPCD2Q86UD0 394 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 C10orf67Q8IYJ2 551 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 ARL10Q8N8L6 244 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 TBC1D5Q92609 795 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 KCNN1Q92952 543 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 EXOC4Q96A65 974 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 TBC1D31Q96DN5 1066 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 DTNBP1Q96EV8 351 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 ASB16Q96NS5 453 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 FAM107BQ9H098 131 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 CCDC68Q9H2F9 335 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 TCF7L2Q9NQB0 619 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 PSD3Q9NYI0 1048 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 IL20Q9NYY1 176 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 SSX2IPQ9Y2D8 614 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 RABGAP1Q9Y3P9 1069 aa6.59□□□□□ -1.35
LSM1P2-201ENST00000604911 CCDC163A0A0D9SF12 145 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 A0A1B0GUA9 196 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 CST3P01034 146 aaPredicted RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 IVLP07476 585 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 USP17L7P0C7H9 530 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 RLBP1P12271 317 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 VAMP1P23763 118 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 ELF1P32519 619 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 TRAPPC10P48553 1259 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 CTAG1AP78358 180 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 PPP2R5BQ15173 497 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 RCN1Q15293 331 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 RRP12Q5JTH9 1297 aaKnown RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 ZNF746Q6NUN9 644 aaPredicted RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 ZCCHC8Q6NZY4 707 aaKnown RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 MPZL3Q6UWV2 235 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 NEK10Q6ZWH5 1172 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 SIAH1Q8IUQ4 282 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 HID1Q8IV36 788 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 LRRC56Q8IYG6 542 aaPredicted RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 TEX19Q8NA77 164 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 SMYD1Q8NB12 490 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 FAM81AQ8TBF8 368 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 RPGRQ92834 1020 aaKnown RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 MRFAP1L1Q96HT8 127 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 ALPK1Q96QP1 1244 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 TANGO6Q9C0B7 1094 aa6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 MMADHCQ9H3L0 296 aaPredicted RBP6.58□□□□□ -1.36
LSM1P2-201ENST00000604911 CLIC5Q9NZA1 410 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms