RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF1-216ENST00000598587 ZNF215Q9UL58 517 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF1-216ENST00000598587 KCNJ14Q9UNX9 436 aa13.71□□□□□ -0.21
ARHGEF1-216ENST00000598587 TANC1Q9C0D5 1861 aa13.71□□□□□ -0.21
ARHGEF1-216ENST00000598587 H0YGN5 161 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 MEIS1O00470 390 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 SORBS3O60504 671 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 MMP1P03956 469 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 HOXD8P13378 290 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 FDPSP14324 419 aaKnown RBP13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 KCNA2P16389 499 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 TLE2Q04725 743 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 PTPN11Q06124 597 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 NFRKBQ6P4R8 1299 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 SLC43A3Q8NBI5 491 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 CRYGNQ8WXF5 182 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 C8orf76Q96K31 380 aa13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 JPH1Q9HDC5 661 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF1-216ENST00000598587 FAM86B1E9PN63 330 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 M0R2N6 131 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 F2P00734 622 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 FAM86B2P0C5J1 330 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 SUPT20HL2P0C7V6 817 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 ZNF286BP0CG31 522 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 CIITAP33076 1130 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 CDK7P50613 346 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 PSMC6P62333 389 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 SP4Q02446 784 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 GNL2Q13823 731 aaKnown RBP13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 NPY5RQ15761 445 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 MOXD1Q6UVY6 613 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 TMX3Q96JJ7 454 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 LBHD1Q9BQE6 289 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 ZNF577Q9BSK1 485 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 AGO4Q9HCK5 861 aaKnown RBP13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 PDLIM7Q9NR12 457 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 TBC1D22BQ9NU19 505 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 PKD2L1Q9P0L9 805 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 SLC9A2Q9UBY0 812 aa13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 ZMYND8Q9ULU4 1186 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF1-216ENST00000598587 IGLV3-22A0A075B6J6 115 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 IPO5O00410 1097 aaKnown RBP13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 LGALS2P05162 132 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 GCFC2P16383 781 aaKnown RBP13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 PSEN2P49810 448 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 CHMP4BP1P59074 171 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 MFSD10Q14728 455 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 KIAA0753Q2KHM9 967 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 NBPF20Q3BBV1 942 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 PRR16Q569H4 304 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 KRT40Q6A162 431 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 NEK8Q86SG6 692 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 FAM126BQ8IXS8 530 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 C7orf31Q8N865 590 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 GPR20Q99678 358 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 TMEM39AQ9NV64 488 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 NOD1Q9Y239 953 aa13.68□□□□□ -0.22
ARHGEF1-216ENST00000598587 TRIP12Q14669 1992 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 H3BRB1 525 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 ADAMTS3O15072 1205 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 ATP9AO75110 1047 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 ARP10275 920 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 RAG1P15918 1043 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 SYN1P17600 705 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 TCF7P36402 384 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 FOSBP53539 338 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 FAAP100Q0VG06 881 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 INF2Q27J81 1249 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 Q4G0T1 1027 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 PIK3AP1Q6ZUJ8 805 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 SESTD1Q86VW0 696 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 DIS3L2Q8IYB7 885 aaKnown RBP13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 CCDC155Q8N6L0 562 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 CYP2W1Q8TAV3 490 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 SEPT1Q8WYJ6 367 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 TUT1Q9H6E5 874 aaKnown RBP13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 AZI2Q9H6S1 392 aa13.67□□□□□ -0.22
ARHGEF1-216ENST00000598587 EMSYQ7Z589 1322 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 KIAA0355O15063 1070 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 CYP3A7P24462 503 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 KRT76Q01546 638 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 KAT2BQ92831 832 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 GJB4Q9NTQ9 266 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 ERAP1Q9NZ08 941 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
ARHGEF1-216ENST00000598587 GRIN2DO15399 1336 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 HAS3O00219 553 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 B4GALT4O60513 344 aa13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 CCNT1O60563 726 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-216ENST00000598587 GAS7O60861 476 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms