RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 NLRC4Q9NPP4 1024 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 USP21Q9UK80 565 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 SPATA31A1Q5TZJ5 1347 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 SNED1Q8TER0 1413 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 EIF3HO15372 352 aaKnown RBP eCLIP11.35□□□□□ -0.592e-7■□□□□ 9.2
ERBB3-214ENST00000550070 TLR2O60603 784 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 TDP2O95551 362 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 FGFR1OPO95684 399 aaKnown RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 GLI1P08151 1106 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 EPB41P11171 864 aaKnown RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.592e-7■■□□□ 12.2
ERBB3-214ENST00000550070 PPP4CP60510 307 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 EHHADHQ08426 723 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 ALS2CLQ60I27 953 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 RAD54LQ92698 747 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 DDX12PQ92771 950 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 ZIM3Q96PE6 472 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 NOX5Q96PH1 765 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 EYA3Q99504 573 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 CDCA7Q9BWT1 371 aaPredicted RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 SEC63Q9UGP8 760 aaKnown RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 A0A087WUV0 522 aaPredicted RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 SSU72P8A0A1W2PR75 194 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 ZSCAN5CA6NGD5 496 aaPredicted RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 HSF2BPO75031 334 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 NOL4O94818 638 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 BAG3O95817 575 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 FAM153BP0C7A2 387 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 CARSP49589 748 aaKnown RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 NAP1L1P55209 391 aaKnown RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 FAM153CQ494X1 144 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 TDRD12Q587J7 1177 aaKnown RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 GBP6Q6ZN66 633 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 TADA2BQ86TJ2 420 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 WDR66Q8TBY9 1149 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 CDK5RAP3Q96JB5 506 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 TANGO6Q9C0B7 1094 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 SRP68Q9UHB9 627 aaKnown RBP11.35□□□□□ -0.59
ERBB3-214ENST00000550070 FAM153AQ9UHL3 310 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 AFF2P51816 1311 aa11.35□□□□□ -0.59
ERBB3-214ENST00000550070 SBF2Q86WG5 1849 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 CDK5RAP2Q96SN8 1893 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 CPP00450 1065 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 ORC2Q13416 577 aaPredicted RBP11.34□□□□□ -0.59
ERBB3-214ENST00000550070 ECM1Q16610 540 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 RNF10Q8N5U6 811 aaKnown RBP11.34□□□□□ -0.59
ERBB3-214ENST00000550070 COA7Q96BR5 231 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 GDF3Q9NR23 364 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 DDX60LQ5H9U9 1706 aaKnown RBP11.34□□□□□ -0.59
ERBB3-214ENST00000550070 ESYT3A0FGR9 886 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 EBAG9O00559 213 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 ZPR1O75312 459 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 PALMO75781 387 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 KRT14P02533 472 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 SKOR1P84550 965 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 APBA1Q02410 837 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 CFAP221Q4G0U5 840 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 GLE1Q53GS7 698 aaKnown RBP11.34□□□□□ -0.59
ERBB3-214ENST00000550070 C16orf86Q6ZW13 317 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 MICALL1Q8N3F8 863 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 SH2D3CQ8N5H7 860 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 NEDD1Q8NHV4 660 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 SNX29Q8TEQ0 813 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 CEP95Q96GE4 821 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 RUFY1Q96T51 708 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 SETDB2Q96T68 719 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 EDEM3Q9BZQ6 932 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 NYXQ9GZU5 481 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 NFU1Q9UMS0 254 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 FAM169AQ9Y6X4 670 aa11.34□□□□□ -0.59
ERBB3-214ENST00000550070 DNA2P51530 1060 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 KCTD16Q68DU8 428 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 RTFDC1Q9BY42 306 aaPredicted RBP11.33□□□□□ -0.6
ERBB3-214ENST00000550070 EPB41L5Q9HCM4 733 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 RIC8AQ9NPQ8 531 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 FRMPD2Q68DX3 1309 aaPredicted RBP11.33□□□□□ -0.6
ERBB3-214ENST00000550070 ESYT2A0FGR8 921 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 FTCDO95954 541 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 KLRC1P26715 233 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 SMARCA1P28370 1054 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 GSTO1P78417 241 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 PSMD2Q13200 908 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 PDCLQ13371 301 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 PDIA5Q14554 519 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 TMEM266Q2M3C6 531 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 SLC9C1Q4G0N8 1177 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 TMEM119Q4V9L6 283 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 ZCWPW2Q504Y3 356 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 FAM83BQ5T0W9 1011 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 SFMBT2Q5VUG0 894 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 IFT20Q8IY31 132 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 DNAJC19Q96DA6 116 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 CCDC43Q96MW1 224 aaKnown RBP11.33□□□□□ -0.6
ERBB3-214ENST00000550070 GPR101Q96P66 508 aaPredicted RBP11.33□□□□□ -0.6
ERBB3-214ENST00000550070 TSG101Q99816 390 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 FGFBP2Q9BYJ0 223 aa11.33□□□□□ -0.6
ERBB3-214ENST00000550070 RIOX1Q9H6W3 641 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms