RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 KATNAL1Q9BW62 490 aa18.72■□□□□ 0.59
PABPC1-221ENST00000522720 HIPK3Q9H422 1215 aa18.72■□□□□ 0.59
PABPC1-221ENST00000522720 NOP56O00567 594 aaKnown RBP18.71■□□□□ 0.59
PABPC1-221ENST00000522720 CDKL5O76039 1030 aa18.71■□□□□ 0.59
PABPC1-221ENST00000522720 CYP2C18P33260 490 aa18.71■□□□□ 0.59
PABPC1-221ENST00000522720 FPGSQ05932 587 aa18.71■□□□□ 0.59
PABPC1-221ENST00000522720 CEP55Q53EZ4 464 aa18.71■□□□□ 0.59
PABPC1-221ENST00000522720 CRYGNQ8WXF5 182 aa18.71■□□□□ 0.59
PABPC1-221ENST00000522720 GPR20Q99678 358 aa18.71■□□□□ 0.59
PABPC1-221ENST00000522720 C16orf70Q9BSU1 422 aa18.71■□□□□ 0.59
PABPC1-221ENST00000522720 PPP1R12CQ9BZL4 782 aa18.71■□□□□ 0.59
PABPC1-221ENST00000522720 MEIS1O00470 390 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 CYP3A4P08684 503 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 EPHB4P54760 987 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 NLRP5P59047 1200 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 ARHGAP4P98171 946 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 MFSD10Q14728 455 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 ME3Q16798 604 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 KIAA0753Q2KHM9 967 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 LRIT3Q3SXY7 679 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 FAM177A1Q8N128 213 aaPredicted RBP18.7■□□□□ 0.58
PABPC1-221ENST00000522720 TMEM199Q8N511 208 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 KCNH7Q9NS40 1196 aa18.7■□□□□ 0.58
PABPC1-221ENST00000522720 LGALS2P05162 132 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 CYP2C9P11712 490 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 ZNF76P36508 570 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 SHHQ15465 462 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 C9orf50Q5SZB4 431 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 GDF6Q6KF10 455 aaPredicted RBP18.69■□□□□ 0.58
PABPC1-221ENST00000522720 NIPA1Q7RTP0 329 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 C7orf31Q8N865 590 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 HDAC6Q9UBN7 1215 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 GTF2IRD1Q9UHL9 959 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 TELO2Q9Y4R8 837 aa18.69■□□□□ 0.58
PABPC1-221ENST00000522720 H3BRB1 525 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 CTDNEP1O95476 244 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 ARP10275 920 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 CSF2RAP15509 400 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 SP4Q02446 784 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 PPIGQ13427 754 aaKnown RBP eCLIP18.68■□□□□ 0.58
PABPC1-221ENST00000522720 PTGISQ16647 500 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 NECAB1Q8N987 351 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 RASGRP4Q8TDF6 673 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 AIFM3Q96NN9 605 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 CTAGE1Q96RT6 745 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 KIF2CQ99661 725 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 TUT1Q9H6E5 874 aaKnown RBP18.68■□□□□ 0.58
PABPC1-221ENST00000522720 PKD2L1Q9P0L9 805 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 PCDHA4Q9UN74 947 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 NOD1Q9Y239 953 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 UMODL1Q5DID0 1318 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 STK36Q9NRP7 1315 aa18.68■□□□□ 0.58
PABPC1-221ENST00000522720 TRIP12Q14669 1992 aaPredicted RBP18.68■□□□□ 0.58
PABPC1-221ENST00000522720 FAM86B1E9PN63 330 aa18.67■□□□□ 0.58
PABPC1-221ENST00000522720 SOX1O00570 391 aaPredicted RBP18.67■□□□□ 0.58
PABPC1-221ENST00000522720 LARGE1O95461 756 aa18.67■□□□□ 0.58
PABPC1-221ENST00000522720 FAM86B2P0C5J1 330 aa18.67■□□□□ 0.58
PABPC1-221ENST00000522720 RBM25P49756 843 aaKnown RBP18.67■□□□□ 0.58
PABPC1-221ENST00000522720 GALNT17Q6IS24 598 aa18.67■□□□□ 0.58
PABPC1-221ENST00000522720 SEPT1Q8WYJ6 367 aa18.67■□□□□ 0.58
PABPC1-221ENST00000522720 GTF3C6Q969F1 213 aa18.67■□□□□ 0.58
PABPC1-221ENST00000522720 C22orf23Q9BZE7 217 aa18.67■□□□□ 0.58
PABPC1-221ENST00000522720 AGO4Q9HCK5 861 aaKnown RBP18.67■□□□□ 0.58
PABPC1-221ENST00000522720 NFASCO94856 1347 aa18.67■□□□□ 0.58
PABPC1-221ENST00000522720 SZT2Q5T011 3432 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 IGLV3-22A0A075B6J6 115 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 GSTTP1A0A1W2PQM5 241 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 CCL23P55773 120 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 NPY5RQ15761 445 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 C16orf59Q7L2K0 433 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 DAGLBQ8NCG7 672 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 WNT8AQ9H1J5 351 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 JPH1Q9HDC5 661 aaPredicted RBP18.66■□□□□ 0.58
PABPC1-221ENST00000522720 ORC3Q9UBD5 711 aaPredicted RBP18.66■□□□□ 0.58
PABPC1-221ENST00000522720 KAT6AQ92794 2004 aa18.66■□□□□ 0.58
PABPC1-221ENST00000522720 M0R2N6 131 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 PITPNM1O00562 1244 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 CIITAP33076 1130 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 TCF7P36402 384 aaPredicted RBP18.65■□□□□ 0.58
PABPC1-221ENST00000522720 ITGB3BPQ13352 177 aaPredicted RBP18.65■□□□□ 0.58
PABPC1-221ENST00000522720 UTP14CQ5TAP6 766 aaKnown RBP18.65■□□□□ 0.58
PABPC1-221ENST00000522720 PLA2G4DQ86XP0 818 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 TRIM50Q86XT4 487 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 BLIDQ8IZY5 108 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 LRCH3Q96II8 777 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 SDF4Q9BRK5 362 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 IL23AQ9NPF7 189 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 SLC9A2Q9UBY0 812 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 ZNF215Q9UL58 517 aaPredicted RBP18.65■□□□□ 0.58
PABPC1-221ENST00000522720 LIMCH1Q9UPQ0 1083 aa18.65■□□□□ 0.58
PABPC1-221ENST00000522720 DTNBO60941 627 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 XBP1P17861 261 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 USP11P51784 963 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 BFSP2Q13515 415 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 HIC1Q14526 733 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 TMEM240Q5SV17 173 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 WASF1Q92558 559 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms