RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 FAM83BQ5T0W9 1011 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 NSMFQ6X4W1 530 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 CD209Q9NNX6 404 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 NFU1Q9UMS0 254 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 NDC80O14777 642 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 ZBTB5O15062 677 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 ZBED4O75132 1171 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 PPM1KQ8N3J5 372 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 NACC1Q96RE7 527 aa18.15■□□□□ 0.5
TCOF1-206ENST00000445265 MEIS1O00470 390 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 NR1D1P20393 614 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 OTUD6AQ7L8S5 288 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 PNMA8AQ86V59 439 aaPredicted RBP18.14■□□□□ 0.49
TCOF1-206ENST00000445265 GRK7Q8WTQ7 553 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 VIPAS39Q9H9C1 493 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 HMGB1P1B2RPK0 211 aaPredicted RBP18.14■□□□□ 0.49
TCOF1-206ENST00000445265 CLIC2O15247 247 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 PALMO75781 387 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 GGCXP38435 758 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 COASYQ13057 564 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 AGTPBP1Q9UPW5 1226 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 PASKQ96RG2 1323 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 CDC37Q16543 378 aaPredicted RBP18.14■□□□□ 0.49
TCOF1-206ENST00000445265 MAGOHBQ96A72 148 aaKnown RBP18.14■□□□□ 0.49
TCOF1-206ENST00000445265 COA1Q9GZY4 146 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 MON2Q7Z3U7 1717 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 A0A1B0GUA9 196 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 GFPT2O94808 682 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 FCER1AP12319 257 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 BMP3P12645 472 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 PDE6CP51160 858 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
TCOF1-206ENST00000445265 C7orf25Q9BPX7 421 aa18.14■□□□□ 0.49
TCOF1-206ENST00000445265 HARSP12081 509 aaKnown RBP18.13■□□□□ 0.49
TCOF1-206ENST00000445265 ATP11AP98196 1134 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 NLRX1Q86UT6 975 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 RUBCNQ92622 972 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 PI4KBQ9UBF8 816 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 ARHGAP23Q9P227 1491 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.13■□□□□ 0.49
TCOF1-206ENST00000445265 HNRNPLLQ8WVV9 542 aaKnown RBP18.13■□□□□ 0.49
TCOF1-206ENST00000445265 PARVGQ9HBI0 331 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 C3P01024 1663 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 NTSR2O95665 410 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 IRX3P78415 501 aaPredicted RBP18.13■□□□□ 0.49
TCOF1-206ENST00000445265 PDIA5Q14554 519 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 DCUN1D2Q6PH85 259 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 ARMC9Q7Z3E5 817 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 NLGN1Q8N2Q7 840 aa18.13■□□□□ 0.49
TCOF1-206ENST00000445265 UBE2Q2LH0YL09 131 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 GFPT1Q06210 699 aaPredicted RBP18.12■□□□□ 0.49
TCOF1-206ENST00000445265 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.12■□□□□ 0.49
TCOF1-206ENST00000445265 USTQ9Y2C2 406 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
TCOF1-206ENST00000445265 FGFR2P21802 821 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 DHX9Q08211 1270 aaKnown RBP18.12■□□□□ 0.49
TCOF1-206ENST00000445265 AOC3Q16853 763 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 LARGE2Q8N3Y3 721 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 TYW1Q9NV66 732 aaKnown RBP18.12■□□□□ 0.49
TCOF1-206ENST00000445265 TMEM260Q9NX78 707 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 SNX12Q9UMY4 172 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 FYB2Q5VWT5 728 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 NFRKBQ6P4R8 1299 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 VSIG1Q86XK7 387 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 MCF2L2Q86YR7 1114 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 PSMD14O00487 310 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 BHMT2Q9H2M3 363 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 KCND1Q9NSA2 647 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 C1orf112Q9NSG2 853 aa18.12■□□□□ 0.49
TCOF1-206ENST00000445265 PRPF6O94906 941 aaKnown RBP18.11■□□□□ 0.49
TCOF1-206ENST00000445265 TNNI1P19237 187 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 STX2P32856 288 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 XKR9Q5GH70 373 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 FAM102BQ5T8I3 360 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 SYDE2Q5VT97 1194 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 GPR101Q96P66 508 aaPredicted RBP18.11■□□□□ 0.49
TCOF1-206ENST00000445265 KCNH2Q12809 1159 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 TRPC3Q13507 836 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 MESDQ14696 234 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 SLC17A8Q8NDX2 589 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 SPATA4Q8NEY3 305 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 MMS19Q96T76 1030 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 ZNF577Q9BSK1 485 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 PPIP5K2O43314 1243 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 MAGEA9P43362 315 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 MFAP3P55082 362 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 IFT88Q13099 833 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 SMC6Q96SB8 1091 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 MAK16Q9BXY0 300 aaKnown RBP18.11■□□□□ 0.49
TCOF1-206ENST00000445265 ATP8A1Q9Y2Q0 1164 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 PDS5AQ29RF7 1337 aaKnown RBP18.11■□□□□ 0.49
TCOF1-206ENST00000445265 GRID2IPA4D2P6 1211 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 ZNF18P17022 549 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 EIF3BP55884 814 aaKnown RBP18.11■□□□□ 0.49
TCOF1-206ENST00000445265 MXRA7P84157 204 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 PDXDC1Q6P996 788 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 CCDC127Q96BQ5 260 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 PNMA2Q9UL42 364 aa18.11■□□□□ 0.49
TCOF1-206ENST00000445265 FAM170AA1A519 330 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms