RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
COPE-202ENST00000349893 MIER1Q8N108 512 aa18.35■□□□□ 0.53
COPE-202ENST00000349893 CLP1Q92989 425 aaKnown RBP18.35■□□□□ 0.53
COPE-202ENST00000349893 EVI5LQ96CN4 794 aa18.35■□□□□ 0.53
COPE-202ENST00000349893 SPATA33Q96N06 139 aa18.35■□□□□ 0.53
COPE-202ENST00000349893 PRRX2Q99811 253 aa18.35■□□□□ 0.53
COPE-202ENST00000349893 PDCD2LQ9BRP1 358 aa18.35■□□□□ 0.53
COPE-202ENST00000349893 C11orf84Q9BUA3 381 aaPredicted RBP18.35■□□□□ 0.53
COPE-202ENST00000349893 RCAN3Q9UKA8 241 aa18.35■□□□□ 0.53
COPE-202ENST00000349893 RWDD3Q9Y3V2 267 aa18.35■□□□□ 0.53
COPE-202ENST00000349893 H3BRB1 525 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 ST18O60284 1047 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 TBX10O75333 385 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 UPP2O95045 317 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 BMPR1AP36894 532 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 PTPN5P54829 565 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 SP2Q02086 613 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 ASPRV1Q53RT3 343 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 FAM26DQ5JW98 314 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 VSIG10LQ86VR7 867 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 TBC1D10CQ8IV04 446 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 FIBCD1Q8N539 461 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 IL17RAQ96F46 866 aa18.34■□□□□ 0.53
COPE-202ENST00000349893 TUT1Q9H6E5 874 aaKnown RBP18.34■□□□□ 0.53
COPE-202ENST00000349893 MAP3K20Q9NYL2 800 aaKnown RBP18.34■□□□□ 0.53
COPE-202ENST00000349893 A0A0D9SFI3 127 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 GRM6O15303 877 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 TREHO43280 583 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 EYA4O95677 639 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 GGPS1O95749 300 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 SMIM10L2AP0DMW4 78 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 SMIM10L2BP0DMW5 78 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 UBA1P22314 1058 aaKnown RBP18.33■□□□□ 0.52
COPE-202ENST00000349893 CTNNB1P35222 781 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 PNMA1Q8ND90 353 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 ESR2Q92731 530 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 RNPEPQ9H4A4 650 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 JMJD4Q9H9V9 463 aa18.33■□□□□ 0.52
COPE-202ENST00000349893 MYO15AQ9UKN7 3530 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 NEDD4P46934 1319 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 ZFHX2Q9C0A1 2572 aaPredicted RBP18.32■□□□□ 0.52
COPE-202ENST00000349893 HAND2P61296 217 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 ADAM17P78536 824 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 IER5LQ5T953 404 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 TRIM67Q6ZTA4 783 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 SAMD3Q8N6K7 520 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 MSLNLQ96KJ4 702 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 FAM227BQ96M60 508 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 RNF41Q9H4P4 317 aaPredicted RBP18.32■□□□□ 0.52
COPE-202ENST00000349893 ALG13Q9NP73 1137 aaKnown RBP18.32■□□□□ 0.52
COPE-202ENST00000349893 KMT2EQ8IZD2 1858 aa18.32■□□□□ 0.52
COPE-202ENST00000349893 ADGRA3Q8IWK6 1321 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 STXBP3O00186 592 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 CFBP00751 764 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 MMP1P03956 469 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 LGALS2P05162 132 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 ADAM15Q13444 863 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 CAMK1Q14012 370 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 PGM5Q15124 567 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 CLUL1Q15846 466 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 CCDC178Q5BJE1 867 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
COPE-202ENST00000349893 PLVAPQ9BX97 442 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 CD207Q9UJ71 328 aa18.31■□□□□ 0.52
COPE-202ENST00000349893 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 TMEM221A6NGB7 291 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 LOC730098B7Z3J9 87 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 M0R296 226 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 CTSHP09668 335 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 TCF15Q12870 199 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 CBX2Q14781 532 aaPredicted RBP18.3■□□□□ 0.52
COPE-202ENST00000349893 IL31RAQ8NI17 732 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 ZNF689Q96CS4 500 aaPredicted RBP18.3■□□□□ 0.52
COPE-202ENST00000349893 MTMR8Q96EF0 704 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 ZKSCAN3Q9BRR0 538 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 TTC3P53804 2025 aa18.3■□□□□ 0.52
COPE-202ENST00000349893 SPTBN4Q9H254 2564 aa18.29■□□□□ 0.52
COPE-202ENST00000349893 GNAT1P11488 350 aa18.29■□□□□ 0.52
COPE-202ENST00000349893 GTF2F1P35269 517 aaKnown RBP eCLIP18.29■□□□□ 0.52
COPE-202ENST00000349893 SMRP1Q8NCR6 262 aa18.29■□□□□ 0.52
COPE-202ENST00000349893 PBXIP1Q96AQ6 731 aa18.29■□□□□ 0.52
COPE-202ENST00000349893 AMNQ9BXJ7 453 aa18.29■□□□□ 0.52
COPE-202ENST00000349893 USP26Q9BXU7 913 aa18.29■□□□□ 0.52
COPE-202ENST00000349893 EHMT1Q9H9B1 1298 aa18.29■□□□□ 0.52
COPE-202ENST00000349893 MLXIPQ9HAP2 919 aa18.29■□□□□ 0.52
COPE-202ENST00000349893 LINC01565O15544 149 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 SORBS3O60504 671 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
COPE-202ENST00000349893 ZXDAP98168 799 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 COASYQ13057 564 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 IQCA1Q86XH1 822 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 GPKOWQ92917 476 aaPredicted RBP eCLIP18.28■□□□□ 0.52
COPE-202ENST00000349893 P2RX5Q93086 422 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 SETD4Q9NVD3 440 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 CLEC1BQ9P126 229 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 PCDHB15Q9Y5E8 787 aa18.28■□□□□ 0.52
COPE-202ENST00000349893 PPP1R11O60927 126 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms