RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 TMTC1Q8IUR5 882 aa11.53□□□□□ -0.56
CAPRIN1-201ENST00000341394 OR8K1Q8NGG5 319 aa11.53□□□□□ -0.56
CAPRIN1-201ENST00000341394 HPS3Q969F9 1004 aa11.53□□□□□ -0.56
CAPRIN1-201ENST00000341394 PIGSQ96S52 555 aa11.53□□□□□ -0.56
CAPRIN1-201ENST00000341394 ZNF185O15231 689 aa11.52□□□□□ -0.56
CAPRIN1-201ENST00000341394 KRT26Q7Z3Y9 468 aa11.52□□□□□ -0.56
CAPRIN1-201ENST00000341394 ANKRD7Q92527 254 aa11.52□□□□□ -0.56
CAPRIN1-201ENST00000341394 THOC1Q96FV9 657 aaKnown RBP11.52□□□□□ -0.56
CAPRIN1-201ENST00000341394 CABS1Q96KC9 395 aa11.52□□□□□ -0.56
CAPRIN1-201ENST00000341394 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.56
CAPRIN1-201ENST00000341394 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.572e-10■■■■□ 23
CAPRIN1-201ENST00000341394 MAP3K14Q99558 947 aa11.52□□□□□ -0.57
CAPRIN1-201ENST00000341394 EHD4Q9H223 541 aa11.52□□□□□ -0.57
CAPRIN1-201ENST00000341394 MRPL44Q9H9J2 332 aaKnown RBP11.52□□□□□ -0.57
CAPRIN1-201ENST00000341394 RMND1Q9NWS8 449 aa11.52□□□□□ -0.57
CAPRIN1-201ENST00000341394 MORC2Q9Y6X9 1032 aaPredicted RBP11.52□□□□□ -0.57
CAPRIN1-201ENST00000341394 VSNL1P62760 191 aa11.52□□□□□ -0.57
CAPRIN1-201ENST00000341394 TTLL12Q14166 644 aaPredicted RBP11.52□□□□□ -0.57
CAPRIN1-201ENST00000341394 RABGGTAQ92696 567 aa11.52□□□□□ -0.57
CAPRIN1-201ENST00000341394 DDNO94850 711 aaPredicted RBP11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 ANGEL2Q5VTE6 544 aaKnown RBP11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 ATL3Q6DD88 541 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 SHC4Q6S5L8 630 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 MICALCLQ6ZW33 695 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 FCHSD1Q86WN1 690 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 C6orf50Q9HD87 102 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 HACL1Q9UJ83 578 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 PACSIN2Q9UNF0 486 aaPredicted RBP11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 STX10O60499 249 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 MOCS3O95396 460 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 PTPAQ15257 358 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 KRT71Q3SY84 523 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 ASPRV1Q53RT3 343 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 DAAM2Q86T65 1068 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 CHP1Q99653 195 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 A0A0U1RQJ8 604 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 KCNK3O14649 394 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 NCK2O43639 380 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 TTBK2Q6IQ55 1244 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 CCDC84Q86UT8 332 aaPredicted RBP11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 SIAH1Q8IUQ4 282 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 ANKRD42Q8N9B4 389 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 PPM1EQ8WY54 764 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 LRWD1Q9UFC0 647 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 JRKLQ9Y4A0 524 aa11.51□□□□□ -0.57
CAPRIN1-201ENST00000341394 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 IGKV6D-41A0A0C4DH26 115 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 CLTAP09496 248 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 AMPD3Q01432 767 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 ACTN3Q08043 901 aaPredicted RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 PFKFB3Q16875 520 aaPredicted RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 C9orf131Q5VYM1 1079 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 SH2D3CQ8N5H7 860 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 EHBP1Q8NDI1 1231 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 FUCA2Q9BTY2 467 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 PHF20Q9BVI0 1012 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 CAPS2Q9BXY5 557 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 PPP1R12CQ9BZL4 782 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 DEFB129Q9H1M3 183 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 DNAJC17Q9NVM6 304 aaKnown RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 SMCO2A6NFE2 343 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 F5H6K3 240 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 PDHBP11177 359 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 TAL1P17542 331 aaPredicted RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 SLCO1A2P46721 670 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 COPB1P53618 953 aaKnown RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 KLRC3Q07444 240 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 HERC4Q5GLZ8 1057 aaPredicted RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 ANKS1AQ92625 1134 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 KRT12Q99456 494 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 CNTNAP1P78357 1384 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 LOC102724159A0A0B4J2E5 919 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 NOVP48745 357 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 ERFP50548 548 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 PWP2Q15269 919 aaKnown RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 ARHGAP44Q17R89 818 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 EAPPQ56P03 285 aaPredicted RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 GPATCH4Q5T3I0 446 aaKnown RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 CCDC50Q8IVM0 306 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 GOLGA5Q8TBA6 731 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 COA7Q96BR5 231 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 FOXP1Q9H334 677 aaPredicted RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 GNA11P29992 359 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 MAP2K2P36507 400 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 ILDR2Q71H61 639 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 BLIDQ8IZY5 108 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 EPB41L5Q9HCM4 733 aa11.5□□□□□ -0.57
CAPRIN1-201ENST00000341394 PALM3A6NDB9 673 aaPredicted RBP11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 CLNS1AP54105 237 aaKnown RBP11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 SNAP25P60880 206 aa11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 BRD3Q15059 726 aa11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 SPATA1Q5VX52 437 aa11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 PHLDB2Q86SQ0 1253 aa11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 NOA1Q8NC60 698 aaKnown RBP11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 TNFRSF25Q93038 417 aa11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 FAM212AQ96EL1 285 aa11.49□□□□□ -0.57
CAPRIN1-201ENST00000341394 POLR3EQ9NVU0 708 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms