RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CIAO1O76071 339 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 CIITAP33076 1130 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 ABCD1P33897 745 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 ANKRD13CQ8N6S4 541 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 ZBTB1Q9Y2K1 713 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 FAN1Q9Y2M0 1017 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 DNMT1P26358 1616 aaKnown RBP14.33□□□□□ -0.12
COL1A1-201ENST00000225964 PPFIA2O75334 1257 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
COL1A1-201ENST00000225964 CDO1Q16878 200 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 INPP5FQ9Y2H2 1132 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 PBRM1Q86U86 1689 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 GFPT2O94808 682 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 PMLP29590 882 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 TTC19Q6DKK2 380 aaPredicted RBP14.33□□□□□ -0.12
COL1A1-201ENST00000225964 ARMCX2Q7L311 632 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 EXT2Q93063 718 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 GCNT4Q9P109 453 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 SUCLA2Q9P2R7 463 aaPredicted RBP14.33□□□□□ -0.12
COL1A1-201ENST00000225964 PI4KBQ9UBF8 816 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 TLK1Q9UKI8 766 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 TCP1P17987 556 aaKnown RBP14.32□□□□□ -0.12
COL1A1-201ENST00000225964 MSH2P43246 934 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 BRD3Q15059 726 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 USP17L2Q6R6M4 530 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 USP44Q9H0E7 712 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 DYNLL2Q96FJ2 89 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 SLC13A4Q9UKG4 626 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 F8W8V4 182 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 IL6STP40189 918 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-201ENST00000225964 CDC37Q16543 378 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-201ENST00000225964 ARL13BQ3SXY8 428 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 NUDCD1Q96RS6 583 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 ABCC12Q96J65 1359 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 ANGPTL8Q6UXH0 198 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 RTKN2Q8IZC4 609 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 CXorf38Q8TB03 319 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 CUEDC2Q9H467 287 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 TMEM2Q9UHN6 1383 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 GOLGA8IPA6NC78 632 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 GOLGA8JA6NMD2 632 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 EIF2AK2P19525 551 aaKnown RBP14.32□□□□□ -0.12
COL1A1-201ENST00000225964 LLGL1Q15334 1064 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 SPOPLQ6IQ16 392 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 SMYD4Q8IYR2 804 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-201ENST00000225964 OR6B3Q8NGW1 331 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 N4BP2L2Q92802 583 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-201ENST00000225964 FAM81BQ96LP2 452 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 MSTO1Q9BUK6 570 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 DHX36Q9H2U1 1008 aaKnown RBP14.32□□□□□ -0.12
COL1A1-201ENST00000225964 SERPINB13Q9UIV8 391 aa14.32□□□□□ -0.12
COL1A1-201ENST00000225964 YWHAHQ04917 246 aaPredicted RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 ZWILCHQ9H900 591 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 TOM1L1O75674 476 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 IL9RQ01113 521 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 NSUN2Q08J23 767 aaKnown RBP eCLIP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 NFX1Q12986 1120 aaKnown RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 SKIV2LQ15477 1246 aaKnown RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 NDUFAF2Q8N183 169 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 SSH3Q8TE77 659 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 DPYSL4O14531 572 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 NPR1P16066 1061 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 SSH2Q76I76 1423 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 FASTKD5Q7L8L6 764 aaKnown RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 TLR7Q9NYK1 1049 aaKnown RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 HMGB1P1B2RPK0 211 aaPredicted RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 CTTNQ14247 550 aaKnown RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 LCORLQ8N3X6 602 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 CAPS2Q9BXY5 557 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 EPN1Q9Y6I3 576 aaPredicted RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 C21orf2O43822 256 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 ZNF445P59923 1031 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 SZRD1Q7Z422 152 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 P2RX5Q93086 422 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 FOXP1Q9H334 677 aaPredicted RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 SRP68Q9UHB9 627 aaKnown RBP14.31□□□□□ -0.12
COL1A1-201ENST00000225964 CAPN7Q9Y6W3 813 aa14.31□□□□□ -0.12
COL1A1-201ENST00000225964 ATP6V1E1P36543 226 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 AK8Q96MA6 479 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 EPS15L1Q9UBC2 864 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 DENND3A2RUS2 1198 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 PRKAB2O43741 272 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 GSPT1P15170 499 aaKnown RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 KPNA2P52292 529 aaKnown RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 ANKRD20A4Q4UJ75 823 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 ANKRD20A8PQ5CZ79 823 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 ANKRD20A2Q5SQ80 823 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 ANKRD20A1Q5TYW2 823 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 RSBN1LQ6PCB5 846 aaPredicted RBP14.3□□□□□ -0.12
COL1A1-201ENST00000225964 RNF207Q6ZRF8 634 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 TMTC3Q6ZXV5 915 aa14.3□□□□□ -0.12
COL1A1-201ENST00000225964 FAM160B2Q86V87 743 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms