RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	CLCN5	P51795	746 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	MRPL12	P52815	198 aa	Known RBP	11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	ZNF200	P98182	395 aa	Predicted RBP	11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	SLFN5	Q08AF3	891 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	MTMR3	Q13615	1198 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	CAMK1	Q14012	370 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	DGKD	Q16760	1214 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	ADGRD2	Q7Z7M1	963 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	RBM23	Q86U06	439 aa	Known RBP	11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	AACS	Q86V21	672 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	DHX37	Q8IY37	1157 aa	Known RBP	11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	KREMEN2	Q8NCW0	462 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	SUSD6	Q92537	303 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	GMCL1	Q96IK5	515 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	DNAJC2	Q99543	621 aa	Known RBP	11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	MFSD1	Q9H3U5	465 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	ZNF292	O60281	2723 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	ATG2A	Q2TAZ0	1938 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	GREB1L	Q9C091	1923 aa	Predicted RBP	11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	ARIH2	O95376	493 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	GH1	P01241	217 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	ICAM1	P05362	532 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	CT47B1	P0C2W7	299 aa	Predicted RBP	11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	EDNRB	P24530	442 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	CALML3	P27482	149 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	MFSD10	Q14728	455 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	KIAA0753	Q2KHM9	967 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	SLFNL1	Q499Z3	407 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	HINFP	Q9BQA5	517 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	ZNF287	Q9HBT7	754 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	PRR12	Q9ULL5	1215 aa		11.16	□□□□□ -0.62
PABPN1-208	ENST00000557702	WDR87	Q6ZQQ6	2873 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	ADGRA3	Q8IWK6	1321 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	MYO10	Q9HD67	2058 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	NFIB	O00712	420 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	GLP2R	O95838	553 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	MCC	P23508	829 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	COL9A2	Q14055	689 aa	Predicted RBP	11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	SBK1	Q52WX2	424 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	NAALADL2	Q58DX5	795 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	RNF207	Q6ZRF8	634 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	CHST3	Q7LGC8	479 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	FAM9B	Q8IZU0	186 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	DNER	Q8NFT8	737 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	APBB2	Q92870	758 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	P2RX5	Q93086	422 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	CHMP4C	Q96CF2	233 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.15	□□□□□ -0.62	4e-15	■■■□□ 14.6
PABPN1-208	ENST00000557702	SORCS3	Q9UPU3	1222 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	MAP1B	P46821	2468 aa	Known RBP	11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	MYH4	Q9Y623	1939 aa		11.15	□□□□□ -0.62
PABPN1-208	ENST00000557702	LCT	P09848	1927 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	MINDY4B	A8MYZ0	360 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	HAS3	O00219	553 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	BRD1	O95696	1058 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	DNAJB1	P25685	340 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	ARHGAP1	Q07960	439 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	BTG3	Q14201	252 aa	Predicted RBP	11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	ANGPT1	Q15389	498 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	LY6K	Q17RY6	165 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	RCSD1	Q6JBY9	416 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	CCDC62	Q6P9F0	684 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	SLC30A10	Q6XR72	485 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	KCTD1	Q719H9	257 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	SERINC5	Q86VE9	423 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	SPPL3	Q8TCT6	385 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	NEK1	Q96PY6	1258 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	HAUS7	Q99871	368 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	TLE6	Q9H808	572 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	NR2E1	Q9Y466	385 aa		11.14	□□□□□ -0.63
PABPN1-208	ENST00000557702	CHD6	Q8TD26	2715 aa		11.13	□□□□□ -0.63
PABPN1-208	ENST00000557702	FSD2	A1L4K1	749 aa		11.13	□□□□□ -0.63
PABPN1-208	ENST00000557702	F2	P00734	622 aa		11.13	□□□□□ -0.63
PABPN1-208	ENST00000557702	ITGB1	P05556	798 aa		11.13	□□□□□ -0.63
PABPN1-208	ENST00000557702	SP100	P23497	879 aa	Predicted RBP	11.13	□□□□□ -0.63
PABPN1-208	ENST00000557702	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.13	□□□□□ -0.63
PABPN1-208	ENST00000557702	SEPT14	Q6ZU15	432 aa		11.13	□□□□□ -0.63
PABPN1-208	ENST00000557702	POF1B	Q8WVV4	589 aa		11.13	□□□□□ -0.63
PABPN1-208	ENST00000557702	IPO8	O15397	1037 aa	Known RBP	11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	CAND2	O75155	1236 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	PRDM1	O75626	825 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	ZNF286B	P0CG31	522 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	TSPY3	P0CV98	308 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	TSPY8	P0CW00	308 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	RPS6	P62753	249 aa	Known RBP	11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	HIC1	Q14526	733 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	UBE3C	Q15386	1083 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	ERC1	Q8IUD2	1116 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	CCDC105	Q8IYK2	499 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	FLCN	Q8NFG4	579 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	CYP2W1	Q8TAV3	490 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	MICAL1	Q8TDZ2	1067 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	ATP8B4	Q8TF62	1192 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	ZNF689	Q96CS4	500 aa	Predicted RBP	11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	TSHZ2	Q9NRE2	1034 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	PAG1	Q9NWQ8	432 aa		11.12	□□□□□ -0.63
PABPN1-208	ENST00000557702	OTOGL	Q3ZCN5	2332 aa		11.11	□□□□□ -0.63
PABPN1-208	ENST00000557702	C17orf102	A2RUQ5	167 aa		11.11	□□□□□ -0.63
PABPN1-208	ENST00000557702	PER2	O15055	1255 aa		11.11	□□□□□ -0.63
PABPN1-208	ENST00000557702	SRGAP2B	P0DMP2	458 aa		11.11	□□□□□ -0.63

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