RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ALS2Q96Q42 1657 aa18.82■□□□□ 0.6
PPP4R3A-208ENST00000555462 A0A087WUV0 522 aaPredicted RBP18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 TARSL2A2RTX5 802 aaKnown RBP18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 SFI1A8K8P3 1242 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 KIAA0754O94854 1291 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 FLT3P36888 993 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 FAM83BQ5T0W9 1011 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 C12orf60Q5U649 245 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 AMOTL1Q8IY63 956 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 UBLCP1Q8WVY7 318 aaPredicted RBP18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 CELF4Q9BZC1 486 aaKnown RBP18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 NID2Q14112 1375 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 FAM196BA6NMK8 535 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 DCDC2CA8MYV0 355 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 FAM114A1Q8IWE2 563 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 PNMA5Q96PV4 448 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 CCSER1Q9C0I3 900 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 BSDC1Q9NW68 430 aaPredicted RBP18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 PLAAQ9Y263 795 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 BCL9O00512 1426 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 ORC4O43929 436 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 TUBBP07437 444 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 RCAN1P53805 252 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 EPHB4P54760 987 aa18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 HERC4Q5GLZ8 1057 aaPredicted RBP18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 SEPT11Q9NVA2 429 aaKnown RBP18.81■□□□□ 0.6
PPP4R3A-208ENST00000555462 ITGA4P13612 1032 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 CFAP221Q4G0U5 840 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 KIRREL3Q8IZU9 778 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 EFCC1Q9HA90 598 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 ARPP21Q9UBL0 812 aaPredicted RBP18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 ZNF804BA4D1E1 1349 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 TLDC2A0PJX2 215 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 OPA1O60313 960 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 SLC9A1P19634 815 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 KLHL30Q0D2K2 578 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 C6orf50Q9HD87 102 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 ATP8A2Q9NTI2 1148 aa18.8■□□□□ 0.6
PPP4R3A-208ENST00000555462 MPHOSPH10O00566 681 aaKnown RBP18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 RPS6KA5O75582 802 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 PARP10Q53GL7 1025 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 KCNV1Q6PIU1 500 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 BAP1Q92560 729 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 PYM1Q9BRP8 204 aaKnown RBP18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 KIAA1024Q9UPX6 916 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 CICQ96RK0 1608 aaPredicted RBP18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 ANO9A1A5B4 782 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 FRMD3A2A2Y4 597 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 RASA1P20936 1047 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 LSP1P33241 339 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 TUBB4BP68371 445 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 GRM4Q14833 912 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 MAN2A1Q16706 1144 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 SFMBT2Q5VUG0 894 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 KCTD1Q719H9 257 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 NLRP3Q96P20 1036 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 ERGIC2Q96RQ1 377 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 GOPCQ9HD26 462 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L15C9J2P7 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L13C9JLJ4 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L11C9JVI0 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L18D6R9N7 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L22D6RA61 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L17D6RBQ6 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L19D6RCP7 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L20D6RJB6 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 TCP1P17987 556 aaKnown RBP18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 NR1D1P20393 614 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 AMPD3Q01432 767 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L24Q0WX57 530 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 USP17L6PQ6QN14 398 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 MDM1Q8TC05 714 aa18.79■□□□□ 0.6
PPP4R3A-208ENST00000555462 ABCB4P21439 1286 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 SPRED3Q2MJR0 410 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 FBXO33Q7Z6M2 555 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 AMIGO3Q86WK7 504 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 CEP57Q86XR8 500 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 FNBP4Q8N3X1 1017 aaPredicted RBP18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 MMGT1Q8N4V1 131 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 AMACRQ9UHK6 382 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 GGT7Q9UJ14 662 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 POTEB3A0JP26 581 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 POTECB2RU33 542 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 M0R2N6 131 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 CLIC2O15247 247 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 CYP4A11Q02928 519 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 PDXDC1Q6P996 788 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 POTEBQ6S5H4 581 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 RPGRIP1Q96KN7 1286 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 TSGA10Q9BZW7 698 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 CDK8P49336 464 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 SLC9C1Q4G0N8 1177 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 TBC1D10BQ4KMP7 808 aaPredicted RBP18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 KRT79Q5XKE5 535 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 IFT20Q8IY31 132 aa18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 PURBQ96QR8 312 aaKnown RBP18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.78■□□□□ 0.6
PPP4R3A-208ENST00000555462 DDX60Q8IY21 1712 aaKnown RBP18.77■□□□□ 0.6
PPP4R3A-208ENST00000555462 NUP98P52948 1817 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms