RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 SPATA1Q5VX52 437 aa16.34■□□□□ 0.21
PPP4R3A-201ENST00000554308 RMND1Q9NWS8 449 aa16.34■□□□□ 0.21
PPP4R3A-201ENST00000554308 ADD3Q9UEY8 706 aaKnown RBP16.34■□□□□ 0.21
PPP4R3A-201ENST00000554308 PGAP2Q9UHJ9 254 aa16.34■□□□□ 0.21
PPP4R3A-201ENST00000554308 MFAP3LO75121 409 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 GYPCP04921 128 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 CCT6AP40227 531 aaKnown RBP16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 ZNF658Q5TYW1 1059 aaPredicted RBP16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 RAB34Q9BZG1 259 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 GLT8D2Q9H1C3 349 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 PSME4Q14997 1843 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 SPDYE3A6NKU9 549 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 ASNSP08243 561 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 PTGER2P43116 358 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.27e-14■■■□□ 16.1
PPP4R3A-201ENST00000554308 VSNL1P62760 191 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 FOXR1Q6PIV2 292 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 SNX29Q8TEQ0 813 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 TBC1D5Q92609 795 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 EXOC4Q96A65 974 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
PPP4R3A-201ENST00000554308 CFBP00751 764 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 ARHGAP4P98171 946 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 DGKZQ13574 1117 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 PRR16Q569H4 304 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 KRT79Q5XKE5 535 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 EEF2KMTQ96G04 330 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 HACL1Q9UJ83 578 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 FAN1Q9Y2M0 1017 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 KIF13BQ9NQT8 1826 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 OPLAHO14841 1288 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 ZNF280AP59817 542 aaPredicted RBP16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 ERVK-24P63145 666 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 ASIC1P78348 528 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 GRB10Q13322 594 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 C10orf67Q8IYJ2 551 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 NOA1Q8NC60 698 aaKnown RBP16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 NELFBQ8WX92 580 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 DEFB129Q9H1M3 183 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 FZD1Q9UP38 647 aa16.32■□□□□ 0.2
PPP4R3A-201ENST00000554308 PHACTR2O75167 634 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 PAK1Q13153 545 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 TNFAIP1Q13829 316 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 PDIA5Q14554 519 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 CDKAL1Q5VV42 579 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 DYMQ7RTS9 669 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 MSANTD4Q8NCY6 345 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 HPS3Q969F9 1004 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 TEPSINQ96N21 525 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 RAB21Q9UL25 225 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 L1RE1Q9UN81 338 aa16.31■□□□□ 0.2
PPP4R3A-201ENST00000554308 TRIM49BA6NDI0 452 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 PHF20L1A8MW92 1017 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 KLRC4O43908 158 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 USP11P51784 963 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 CYP2W1Q8TAV3 490 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 CHURC1Q8WUH1 139 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 PNMA5Q96PV4 448 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 CTAGE9A4FU28 777 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 GCFC2P16383 781 aaKnown RBP16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 RPS12P25398 132 aaKnown RBP16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 ECM1Q16610 540 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 NBPF12Q5TAG4 269 aaPredicted RBP16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 NCAPH2Q6IBW4 605 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 SV2BQ7L1I2 683 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 HDXQ7Z353 690 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 KCNK18Q7Z418 384 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 CEP112Q8N8E3 955 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 GOLGA5Q8TBA6 731 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 CUEDC2Q9H467 287 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 TRIM10Q9UDY6 481 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 SMCHD1A6NHR9 2005 aa16.3■□□□□ 0.2
PPP4R3A-201ENST00000554308 FZD9O00144 591 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 MYO1CO00159 1063 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 STAT3P40763 770 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 ARHGAP25P42331 645 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 SLC20A2Q08357 652 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 PDE4DQ08499 809 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 AP3B2Q13367 1082 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 HNRNPLLQ8WVV9 542 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 BLOC1S4Q9NUP1 217 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 ZNF541Q9H0D2 1346 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 FAM86B1E9PN63 330 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 FAM86B2P0C5J1 330 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 FCER1AP12319 257 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 UBXN2AP68543 259 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 AMPD3Q01432 767 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 CT47A1Q5JQC4 288 aaPredicted RBP16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 ARHGAP27Q6ZUM4 889 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 LARP4BQ92615 738 aaKnown RBP16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 VPS16Q9H269 839 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
PPP4R3A-201ENST00000554308 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms