RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 MAP9Q49MG5 647 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 NOL9Q5SY16 702 aaKnown RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 MAP3K21Q5TCX8 1036 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 ZNF804AQ7Z570 1209 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CKAP2LQ8IYA6 745 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CEP57L1Q8IYX8 460 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 PRPF38AQ8NAV1 312 aaKnown RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CTCFLQ8NI51 663 aaPredicted RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 MIEF2Q96C03 454 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 TTF2Q9UNY4 1162 aaKnown RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 SLC45A1Q9Y2W3 748 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 PNMA6FA0A0J9YX94 578 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 TMEM229AB2RXF0 380 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 SNAP23O00161 211 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 HOXB7P09629 217 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 AARSP49588 968 aaKnown RBP eCLIP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 MNAT1P51948 309 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 MRPL12P52815 198 aaKnown RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CACNB3P54284 484 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 PPP2R3AQ06190 1150 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CHRNDQ07001 517 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 DSC3Q14574 896 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CRYMQ14894 314 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CAMK4Q16566 473 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 HSP90B2PQ58FF3 399 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 GORABQ5T7V8 394 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 CCDC30Q5VVM6 783 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 PPP1R18Q6NYC8 613 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 HOMER1Q86YM7 354 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 ERCC4Q92889 916 aaPredicted RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 SGSM3Q96HU1 749 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 VPS18Q9P253 973 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 L1RE1Q9UN81 338 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 AKAP2Q9Y2D5 859 aa5.18□□□□□ -1.58
CNGA1-209ENST00000544810 TMA7Q9Y2S6 64 aaKnown RBP5.18□□□□□ -1.58
CNGA1-209ENST00000544810 A0A1W2PRU2 124 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 URI1O94763 535 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 IGHA2P01877 340 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 RACK1P63244 317 aaKnown RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 COL19A1Q14993 1142 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 ARMCX5Q6P1M9 558 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 GBP6Q6ZN66 633 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 SH3RF1Q7Z6J0 888 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 FAM83AQ86UY5 434 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 GIMAP7Q8NHV1 300 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 RNF217Q8TC41 542 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 BICD2Q8TD16 824 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 TRIB2Q92519 343 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 CCDC34Q96HJ3 373 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 FAM210AQ96ND0 272 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 NECAB3Q96P71 396 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 P2RX7Q99572 595 aaKnown RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 TGIF2Q9GZN2 237 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 ZNF112Q9UJU3 913 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 CFAP45Q9UL16 551 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 CACNA1FO60840 1977 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 MGAMO43451 1857 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 A0A0G2JLL6 359 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 ARHGAP6O43182 974 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 NR1I2O75469 434 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 GCFC2P16383 781 aaKnown RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 ELF1P32519 619 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 PPP4CP60510 307 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 DAB2P98082 770 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 ICA1Q05084 483 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 ANKRD1Q15327 319 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 MFSD14BQ5SR56 506 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 AKNAD1Q5T1N1 836 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 FKBP1CQ5VVH2 108 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 LARP1BQ659C4 914 aaKnown RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 KCNV1Q6PIU1 500 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 C11orf57Q6ZUT1 292 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 NOL8Q76FK4 1167 aaKnown RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 FASTKD5Q7L8L6 764 aaKnown RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 PRRT2Q7Z6L0 340 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 AMOTL1Q8IY63 956 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 TEX11Q8IYF3 940 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 CEP112Q8N8E3 955 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 SMCR8Q8TEV9 937 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 GPKOWQ92917 476 aaPredicted RBP eCLIP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 VTI1AQ96AJ9 217 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 FAXDC2Q96IV6 333 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 LRRCC1Q9C099 1032 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 LSG1Q9H089 658 aaKnown RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 PDE11AQ9HCR9 933 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 MCM8Q9UJA3 840 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 GJD2Q9UKL4 321 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 INPP5FQ9Y2H2 1132 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 MAST2Q6P0Q8 1798 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 SPEF2Q9C093 1822 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 VPS37CA5D8V6 355 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 CHL1O00533 1208 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 CHUKO15111 745 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 RAB11FIP3O75154 756 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 MCCD1P59942 119 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 FAM110CQ1W6H9 321 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 PREPLQ4J6C6 727 aaPredicted RBP5.17□□□□□ -1.58
CNGA1-209ENST00000544810 TMEM31Q5JXX7 168 aa5.17□□□□□ -1.58
CNGA1-209ENST00000544810 COX20Q5RI15 118 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms