RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 VTI1BQ9UEU0 232 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 NPHP3-ACAD11A0A0J9YXS1 232 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 IMPDH2P12268 514 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 MLLT6P55198 1093 aaPredicted RBP1.69□□□□□ -2.14
COPB1-212ENST00000534771 KRTAP10-5P60370 271 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 NFATC3Q12968 1075 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 ADAM9Q13443 819 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 DPY19L1Q2PZI1 675 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 CR1LQ2VPA4 569 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 NRN1LQ496H8 165 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 USP39Q53GS9 565 aaKnown RBP1.69□□□□□ -2.14
COPB1-212ENST00000534771 PKN3Q6P5Z2 889 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 ADAT2Q7Z6V5 191 aaKnown RBP1.69□□□□□ -2.14
COPB1-212ENST00000534771 MRGPRGQ86SM5 289 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 PPFIBP1Q86W92 1011 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 KLHL36Q8N4N3 616 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 TAB3Q8N5C8 712 aaPredicted RBP1.69□□□□□ -2.14
COPB1-212ENST00000534771 PLEKHO2Q8TD55 490 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 MBD6Q96DN6 1003 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 YTHDC1Q96MU7 727 aaKnown RBP1.69□□□□□ -2.14
COPB1-212ENST00000534771 CLIC6Q96NY7 704 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 TM9SF2Q99805 663 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 YIPF4Q9BSR8 244 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 NT5C1AQ9BXI3 368 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 FAM86C1Q9NVL1 165 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 MARCH2Q9P0N8 246 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 WHRNQ9P202 907 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 FTSJ1Q9UET6 329 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 GGT7Q9UJ14 662 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 BACE2Q9Y5Z0 518 aa1.69□□□□□ -2.14
COPB1-212ENST00000534771 CNTNAP2Q9UHC6 1331 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 C22orf46C9J442 243 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 STXBP3O00186 592 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 PLSCR1O15162 318 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 CBFA2T2O43439 604 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 PPM1BO75688 479 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 STAT5AP42229 794 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 AMPD2Q01433 879 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 LSM12Q3MHD2 195 aaKnown RBP1.68□□□□□ -2.14
COPB1-212ENST00000534771 COLEC12Q5KU26 742 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 UNC5AQ6ZN44 842 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 HS2ST1Q7LGA3 356 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 C14orf37Q86TY3 774 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 FAM126BQ8IXS8 530 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 EDAQ92838 391 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 EXTL1Q92935 676 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 TOE1Q96GM8 510 aaKnown RBP1.68□□□□□ -2.14
COPB1-212ENST00000534771 FERD3LQ96RJ6 166 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 ADOQ96SZ5 270 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 MMP19Q99542 508 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 GBP3Q9H0R5 595 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 SEC61A2Q9H9S3 476 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 ADAMTS1Q9UHI8 967 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 CROTQ9UKG9 612 aa1.68□□□□□ -2.14
COPB1-212ENST00000534771 ZNF214Q9UL59 606 aaPredicted RBP1.68□□□□□ -2.14
COPB1-212ENST00000534771 PATL2C9JE40 543 aaKnown RBP1.67□□□□□ -2.14
COPB1-212ENST00000534771 FOXS1O43638 330 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 THBDP07204 575 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 GUCY2CP25092 1073 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 SLC6A11P48066 632 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 PTH1RQ03431 593 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 ZYXQ15942 572 aaKnown RBP1.67□□□□□ -2.14
COPB1-212ENST00000534771 GNPTABQ3T906 1256 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 MROH9Q5TGP6 573 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 FBXW10Q5XX13 1052 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 HEATR6Q6AI08 1181 aaKnown RBP1.67□□□□□ -2.14
COPB1-212ENST00000534771 IQCEQ6IPM2 695 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 TCTN3Q6NUS6 607 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 TRMT10BQ6PF06 316 aaKnown RBP1.67□□□□□ -2.14
COPB1-212ENST00000534771 RNF207Q6ZRF8 634 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 GAREM2Q75VX8 874 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 CEP68Q76N32 757 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 TAX1BP1Q86VP1 789 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 C1orf210Q8IVY1 113 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 TEX2Q8IWB9 1127 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 ARHGEF39Q8N4T4 335 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 ZBTB8BQ8NAP8 495 aaPredicted RBP1.67□□□□□ -2.14
COPB1-212ENST00000534771 RBBP8NLQ8NC74 664 aaPredicted RBP1.67□□□□□ -2.14
COPB1-212ENST00000534771 GIMAP8Q8ND71 665 aaPredicted RBP1.67□□□□□ -2.14
COPB1-212ENST00000534771 ADCY4Q8NFM4 1077 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 DPF3Q92784 378 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 RCC1LQ96I51 464 aaKnown RBP1.67□□□□□ -2.14
COPB1-212ENST00000534771 ZSWIM3Q96MP5 696 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 GNRHR2Q96P88 292 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 HAUS7Q99871 368 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 GPRC5CQ9NQ84 441 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 BTG4Q9NY30 223 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 ADAM29Q9UKF5 820 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 ZNRF3Q9ULT6 936 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 SLC12A7Q9Y666 1083 aa1.67□□□□□ -2.14
COPB1-212ENST00000534771 HGSO14964 777 aaPredicted RBP1.66□□□□□ -2.14
COPB1-212ENST00000534771 LRG1P02750 347 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 PLS3P13797 630 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 COMTP21964 271 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 GTF2A2P52657 109 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 DGCR2P98153 550 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 SLC7A5Q01650 507 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 TAGLNQ01995 201 aaKnown RBP1.66□□□□□ -2.14
COPB1-212ENST00000534771 GRB10Q13322 594 aa1.66□□□□□ -2.14
COPB1-212ENST00000534771 CHRNA2Q15822 529 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms