RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 EDNRBP24530 442 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 HSD17B4P51659 736 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 APOBRQ0VD83 1088 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 RTN1Q16799 776 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 PPP2R2DQ66LE6 453 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 DEFB128Q7Z7B8 93 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 RPUSD2Q8IZ73 545 aaKnown RBP22.02■■□□□ 1.12
PKP3-204ENST00000526971 SAMD3Q8N6K7 520 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 TAAR1Q96RJ0 339 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 MPHOSPH6Q99547 160 aaKnown RBP22.02■■□□□ 1.12
PKP3-204ENST00000526971 MAP3K20Q9NYL2 800 aaKnown RBP22.02■■□□□ 1.12
PKP3-204ENST00000526971 COL20A1Q9P218 1284 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 SEC63Q9UGP8 760 aaKnown RBP22.02■■□□□ 1.12
PKP3-204ENST00000526971 PCDHA11Q9Y5I1 949 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 CYP46A1Q9Y6A2 500 aa22.02■■□□□ 1.12
PKP3-204ENST00000526971 GOLGA8AA7E2F4 631 aa22.01■■□□□ 1.11
PKP3-204ENST00000526971 GOLGA8BA8MQT2 603 aa22.01■■□□□ 1.11
PKP3-204ENST00000526971 CFBP00751 764 aa22.01■■□□□ 1.11
PKP3-204ENST00000526971 CPT1AP50416 773 aa22.01■■□□□ 1.11
PKP3-204ENST00000526971 NBPF20Q3BBV1 942 aa22.01■■□□□ 1.11
PKP3-204ENST00000526971 CCDC82Q8N4S0 544 aa22.01■■□□□ 1.11
PKP3-204ENST00000526971 ADAMTS19Q8TE59 1207 aa22.01■■□□□ 1.11
PKP3-204ENST00000526971 MTG1Q9BT17 334 aaPredicted RBP22.01■■□□□ 1.11
PKP3-204ENST00000526971 NAP1L2Q9ULW6 460 aaPredicted RBP22.01■■□□□ 1.11
PKP3-204ENST00000526971 B4DLN1 442 aa22■■□□□ 1.11
PKP3-204ENST00000526971 ARIH2O95376 493 aa22■■□□□ 1.11
PKP3-204ENST00000526971 ATP2A2P16615 1042 aaKnown RBP22■■□□□ 1.11
PKP3-204ENST00000526971 MRPL12P52815 198 aaKnown RBP22■■□□□ 1.11
PKP3-204ENST00000526971 PDE4DQ08499 809 aa22■■□□□ 1.11
PKP3-204ENST00000526971 NSUN6Q8TEA1 469 aaKnown RBP22■■□□□ 1.11
PKP3-204ENST00000526971 FAM217BQ9NTX9 383 aaPredicted RBP22■■□□□ 1.11
PKP3-204ENST00000526971 COL4A4P53420 1690 aaPredicted RBP22■■□□□ 1.11
PKP3-204ENST00000526971 GCOM1H8Y6P7 765 aaPredicted RBP21.99■■□□□ 1.11
PKP3-204ENST00000526971 ARHGEF15O94989 841 aa21.99■■□□□ 1.11
PKP3-204ENST00000526971 POLR2MP0CAP2 368 aa21.99■■□□□ 1.11
PKP3-204ENST00000526971 ANAPC15P60006 121 aa21.99■■□□□ 1.11
PKP3-204ENST00000526971 MRPS5P82675 430 aaKnown RBP21.99■■□□□ 1.11
PKP3-204ENST00000526971 FUT2Q10981 343 aa21.99■■□□□ 1.11
PKP3-204ENST00000526971 PPP2R5BQ15173 497 aa21.99■■□□□ 1.11
PKP3-204ENST00000526971 FAM47CQ5HY64 1035 aa21.99■■□□□ 1.11
PKP3-204ENST00000526971 RMDN3Q96TC7 470 aa21.99■■□□□ 1.11
PKP3-204ENST00000526971 EPOPA6NHQ4 379 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 RBAK-RBAKDNI3L0D1 243 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 RFXAPO00287 272 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 SEC24BO95487 1268 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 CA3P07451 260 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 PFKMP08237 780 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 SUPT20HL2P0C7V6 817 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 CDC27P30260 824 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 HOXA13P31271 388 aaPredicted RBP21.98■■□□□ 1.11
PKP3-204ENST00000526971 METAP2P50579 478 aaKnown RBP eCLIP21.98■■□□□ 1.11
PKP3-204ENST00000526971 EVCP57679 992 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 MICALL1Q8N3F8 863 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 IWS1Q96ST2 819 aa21.98■■□□□ 1.11
PKP3-204ENST00000526971 UPF3BQ9BZI7 483 aaKnown RBP21.98■■□□□ 1.11
PKP3-204ENST00000526971 CCDC196A0A1B0GTZ2 297 aa21.97■■□□□ 1.11
PKP3-204ENST00000526971 hCG_1642624A0A1W2PR95 340 aa21.97■■□□□ 1.11
PKP3-204ENST00000526971 A6NJR5 290 aa21.97■■□□□ 1.11
PKP3-204ENST00000526971 TOB2Q14106 344 aaPredicted RBP21.97■■□□□ 1.11
PKP3-204ENST00000526971 ARHGEF16Q5VV41 709 aa21.97■■□□□ 1.11
PKP3-204ENST00000526971 SCFD2Q8WU76 684 aa21.97■■□□□ 1.11
PKP3-204ENST00000526971 NECAB3Q96P71 396 aaPredicted RBP21.97■■□□□ 1.11
PKP3-204ENST00000526971 RAPGEFL1Q9UHV5 662 aa21.97■■□□□ 1.11
PKP3-204ENST00000526971 CNTNAP5Q8WYK1 1306 aa21.97■■□□□ 1.11
PKP3-204ENST00000526971 BRWD1Q9NSI6 2320 aa21.97■■□□□ 1.11
PKP3-204ENST00000526971 MYH7BA7E2Y1 1941 aa21.96■■□□□ 1.11
PKP3-204ENST00000526971 NKRFO15226 690 aaKnown RBP eCLIP21.96■■□□□ 1.11
PKP3-204ENST00000526971 ADD1P35611 737 aaKnown RBP21.96■■□□□ 1.11
PKP3-204ENST00000526971 NFRKBQ6P4R8 1299 aa21.96■■□□□ 1.11
PKP3-204ENST00000526971 UHRF1Q96T88 793 aaPredicted RBP21.96■■□□□ 1.11
PKP3-204ENST00000526971 CERS4Q9HA82 394 aa21.96■■□□□ 1.11
PKP3-204ENST00000526971 PXMP2Q9NR77 195 aa21.96■■□□□ 1.11
PKP3-204ENST00000526971 PDRG1Q9NUG6 133 aa21.96■■□□□ 1.11
PKP3-204ENST00000526971 V9GY48 417 aaPredicted RBP21.96■■□□□ 1.11
PKP3-204ENST00000526971 NID2Q14112 1375 aa21.96■■□□□ 1.11
PKP3-204ENST00000526971 IQCF3P0C7M6 154 aa21.95■■□□□ 1.1
PKP3-204ENST00000526971 TXNP10599 105 aaKnown RBP21.95■■□□□ 1.1
PKP3-204ENST00000526971 EIF2AK2P19525 551 aaKnown RBP21.95■■□□□ 1.1
PKP3-204ENST00000526971 COL9A1P20849 921 aa21.95■■□□□ 1.1
PKP3-204ENST00000526971 PDIA3P30101 505 aaKnown RBP21.95■■□□□ 1.1
PKP3-204ENST00000526971 TFF2Q03403 129 aa21.95■■□□□ 1.1
PKP3-204ENST00000526971 IL17RAQ96F46 866 aa21.95■■□□□ 1.1
PKP3-204ENST00000526971 CTAGE1Q96RT6 745 aa21.95■■□□□ 1.1
PKP3-204ENST00000526971 PITPNM1O00562 1244 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 NR3C2P08235 984 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 STXBP2Q15833 593 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 C8orf34Q49A92 452 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 KRT40Q6A162 431 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 CCDC62Q6P9F0 684 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 HEATR3Q7Z4Q2 680 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 SPRED2Q7Z698 418 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 FCHSD1Q86WN1 690 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 MTCH2Q9Y6C9 303 aa21.94■■□□□ 1.1
PKP3-204ENST00000526971 PIK3CDO00329 1044 aa21.93■■□□□ 1.1
PKP3-204ENST00000526971 RFC2P35250 354 aa21.93■■□□□ 1.1
PKP3-204ENST00000526971 GPKOWQ92917 476 aaPredicted RBP eCLIP21.93■■□□□ 1.1
PKP3-204ENST00000526971 CUL5Q93034 780 aa21.93■■□□□ 1.1
PKP3-204ENST00000526971 SLC9A7Q96T83 725 aa21.93■■□□□ 1.1
PKP3-204ENST00000526971 PDCD2LQ9BRP1 358 aa21.93■■□□□ 1.1
PKP3-204ENST00000526971 PSTPIP2Q9H939 334 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms