RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SPIRE1Q08AE8 756 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 ECM1Q16610 540 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 CCDC144BQ3MJ40 725 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 CEP55Q53EZ4 464 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 MUM1L1Q5H9M0 696 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 SH3D19Q5HYK7 790 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 CDKAL1Q5VV42 579 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 POTEBQ6S5H4 581 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 KRT26Q7Z3Y9 468 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 KCNK18Q7Z418 384 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 FILIP1Q7Z7B0 1213 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 ADSSL1Q8N142 457 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 CCDC150Q8NCX0 1101 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 GIMAP8Q8ND71 665 aaPredicted RBP10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 SLC5A5Q92911 643 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 MED15Q96RN5 788 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 HOMER2Q9NSB8 354 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 SAMSN1Q9NSI8 373 aaKnown RBP10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 RNF146Q9NTX7 359 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
SMARCC1-208ENST00000492896 PVALEFA0A1B0GWK0 134 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 MED24O75448 989 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 PLA2G4BP0C869 781 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 RPA1P27694 616 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 SPAG1Q07617 926 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 COG2Q14746 738 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 GPR162Q16538 588 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 TKFCQ3LXA3 575 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 COBLL1Q53SF7 1204 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 HSP90AA4PQ58FG1 418 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 LRCH2Q5VUJ6 765 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 SLC30A10Q6XR72 485 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 CATSPERGQ6ZRH7 1159 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 NIPA1Q7RTP0 329 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 REPS2Q8NFH8 660 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 CYP2W1Q8TAV3 490 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 SYTL5Q8TDW5 730 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 ZC3H15Q8WU90 426 aaKnown RBP10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 CDCA5Q96FF9 252 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 DHTKD1Q96HY7 919 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 MXRA8Q9BRK3 442 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 TEKT3Q9BXF9 490 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 WDR11Q9BZH6 1224 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 BMP2KQ9NSY1 1161 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 COL20A1Q9P218 1284 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
SMARCC1-208ENST00000492896 BICDL2A1A5D9 508 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 E9PMD0 336 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 MEIS1O00470 390 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 GAS7O60861 476 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 SSBP05455 408 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 POTEIP0CG38 1075 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 RPS6P62753 249 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 PPP2R5CQ13362 524 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 FILIP1LQ4L180 1135 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 PCNX4Q63HM2 1172 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 SNRNP48Q6IEG0 339 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 POTEEQ6S8J3 1075 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 RNF207Q6ZRF8 634 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 DYMQ7RTS9 669 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 GPBP1Q86WP2 473 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 VSTM4Q8IW00 320 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 ANKRD20A12PQ8NF67 263 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 NOC3LQ8WTT2 800 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 DDX12PQ92771 950 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 WNK4Q96J92 1243 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 TRIM47Q96LD4 638 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 CTAGE1Q96RT6 745 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 ZNF577Q9BSK1 485 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 POLR3CQ9BUI4 534 aaPredicted RBP10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 TUFT1Q9NNX1 390 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 PYCARDQ9ULZ3 195 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 ADAMTS5Q9UNA0 930 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 MAPK8IP1Q9UQF2 711 aa10.21□□□□□ -0.77
SMARCC1-208ENST00000492896 DOCK5Q9H7D0 1870 aa10.21□□□□□ -0.78
SMARCC1-208ENST00000492896 A0A1B0GTH6 734 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 IQCA1LA6NCM1 817 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 GLTPD2A6NH11 291 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 LRRC37A2A6NM11 1700 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 SPDYE16A6NNV3 312 aaPredicted RBP10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 ATP2A1O14983 1001 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 GRIN3BO60391 1043 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 PSMD10O75832 226 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 KRT18P05783 430 aaKnown RBP10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 ARP10275 920 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 BCRP11274 1271 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 FCER1AP12319 257 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 IDEP14735 1019 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 CCNE1P24864 410 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 LRMPQ12912 555 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 COASYQ13057 564 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 PSMD2Q13200 908 aa10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 TTLL12Q14166 644 aaPredicted RBP10.2□□□□□ -0.78
SMARCC1-208ENST00000492896 ARID2Q68CP9 1835 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms