RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PDE4DQ08499 809 aa18.08■□□□□ 0.48
U2AF1-211ENST00000486519 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.48
U2AF1-211ENST00000486519 CHST3Q7LGC8 479 aa18.08■□□□□ 0.48
U2AF1-211ENST00000486519 PCDHGC5Q9Y5F6 944 aa18.08■□□□□ 0.48
U2AF1-211ENST00000486519 PLIN4Q96Q06 1357 aa18.07■□□□□ 0.48
U2AF1-211ENST00000486519 SLC16A2P36021 539 aa18.07■□□□□ 0.48
U2AF1-211ENST00000486519 BMPR1AP36894 532 aa18.07■□□□□ 0.48
U2AF1-211ENST00000486519 NKD2Q969F2 451 aaPredicted RBP18.07■□□□□ 0.48
U2AF1-211ENST00000486519 RIPOR3Q96MK2 946 aa18.07■□□□□ 0.48
U2AF1-211ENST00000486519 STRBPQ96SI9 672 aaKnown RBP18.07■□□□□ 0.48
U2AF1-211ENST00000486519 IFIH1Q9BYX4 1025 aaKnown RBP18.07■□□□□ 0.48
U2AF1-211ENST00000486519 SMOC2Q9H3U7 446 aa18.07■□□□□ 0.48
U2AF1-211ENST00000486519 SYNPO2Q9UMS6 1093 aa18.07■□□□□ 0.48
U2AF1-211ENST00000486519 MTMR7Q9Y216 660 aa18.07■□□□□ 0.48
U2AF1-211ENST00000486519 HAS3O00219 553 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 ICAM3P32942 547 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 COASYQ13057 564 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 UBE3CQ15386 1083 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 PTPN21Q16825 1174 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 C7orf31Q8N865 590 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 RHPN1Q8TCX5 695 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 LMAN2LQ9H0V9 348 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 RANBP17Q9H2T7 1088 aaKnown RBP18.06■□□□□ 0.48
U2AF1-211ENST00000486519 WDR87Q6ZQQ6 2873 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 ZNF292O60281 2723 aa18.06■□□□□ 0.48
U2AF1-211ENST00000486519 RSPH10B2B2RC85 870 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 PLA2G6O60733 806 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 MMP1P03956 469 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 RSPH10BP0C881 870 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 THPOP40225 353 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 MFSD10Q14728 455 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 KIAA0753Q2KHM9 967 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 RCSD1Q6JBY9 416 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 CEP85Q6P2H3 762 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 ZNF444Q8N0Y2 327 aaPredicted RBP18.05■□□□□ 0.48
U2AF1-211ENST00000486519 FIBCD1Q8N539 461 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 NEDD1Q8NHV4 660 aa18.05■□□□□ 0.48
U2AF1-211ENST00000486519 PHF7Q9BWX1 381 aaPredicted RBP18.05■□□□□ 0.48
U2AF1-211ENST00000486519 RC3H2Q9HBD1 1191 aaKnown RBP18.05■□□□□ 0.48
U2AF1-211ENST00000486519 LOC102724159A0A0B4J2E5 919 aa18.04■□□□□ 0.48
U2AF1-211ENST00000486519 ANP32CO43423 234 aa18.04■□□□□ 0.48
U2AF1-211ENST00000486519 NMT2O60551 498 aa18.04■□□□□ 0.48
U2AF1-211ENST00000486519 SP100P23497 879 aaPredicted RBP18.04■□□□□ 0.48
U2AF1-211ENST00000486519 RPS6P62753 249 aaKnown RBP18.04■□□□□ 0.48
U2AF1-211ENST00000486519 PWP2Q15269 919 aaKnown RBP18.04■□□□□ 0.48
U2AF1-211ENST00000486519 C11orf84Q9BUA3 381 aaPredicted RBP18.04■□□□□ 0.48
U2AF1-211ENST00000486519 EMSYQ7Z589 1322 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 GH1P01241 217 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 RNF207Q6ZRF8 634 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 SEPT14Q6ZU15 432 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 DGLUCYQ7Z3D6 616 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 RBM23Q86U06 439 aaKnown RBP18.03■□□□□ 0.48
U2AF1-211ENST00000486519 EFHBQ8N7U6 833 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 VN1R2Q8NFZ6 395 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 IL17RAQ96F46 866 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 CFAP47Q6ZTR5 3102 aa18.03■□□□□ 0.48
U2AF1-211ENST00000486519 F2P00734 622 aa18.02■□□□□ 0.48
U2AF1-211ENST00000486519 RB1P06400 928 aa18.02■□□□□ 0.48
U2AF1-211ENST00000486519 CTSHP09668 335 aa18.02■□□□□ 0.48
U2AF1-211ENST00000486519 CASTP20810 708 aaKnown RBP18.02■□□□□ 0.48
U2AF1-211ENST00000486519 NRIP1P48552 1158 aa18.02■□□□□ 0.48
U2AF1-211ENST00000486519 TFAP4Q01664 338 aa18.02■□□□□ 0.48
U2AF1-211ENST00000486519 SERINC5Q86VE9 423 aa18.02■□□□□ 0.48
U2AF1-211ENST00000486519 CLP1Q92989 425 aaKnown RBP18.02■□□□□ 0.48
U2AF1-211ENST00000486519 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.02■□□□□ 0.48
U2AF1-211ENST00000486519 PLAGL2Q9UPG8 496 aa18.02■□□□□ 0.48
U2AF1-211ENST00000486519 TPRP12270 2363 aaKnown RBP18.02■□□□□ 0.47
U2AF1-211ENST00000486519 ADGRA3Q8IWK6 1321 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 EP300Q09472 2414 aaPredicted RBP18.01■□□□□ 0.47
U2AF1-211ENST00000486519 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
U2AF1-211ENST00000486519 SORBS3O60504 671 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 TSPY3P0CV98 308 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 TSPY8P0CW00 308 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 NUBP1P53384 320 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 ERC1Q8IUD2 1116 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 SUSD6Q92537 303 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 SEPT8Q92599 483 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 OSBP2Q969R2 916 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 HAUS7Q99871 368 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 IL17RBQ9NRM6 502 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 CDH22Q9UJ99 828 aa18.01■□□□□ 0.47
U2AF1-211ENST00000486519 ITGB1P05556 798 aa18■□□□□ 0.47
U2AF1-211ENST00000486519 RLBP1P12271 317 aa18■□□□□ 0.47
U2AF1-211ENST00000486519 DGKDQ16760 1214 aa18■□□□□ 0.47
U2AF1-211ENST00000486519 TBC1D5Q92609 795 aa18■□□□□ 0.47
U2AF1-211ENST00000486519 TTC3P53804 2025 aa17.99■□□□□ 0.47
U2AF1-211ENST00000486519 FRMPD2Q68DX3 1309 aaPredicted RBP17.99■□□□□ 0.47
U2AF1-211ENST00000486519 BRD1O95696 1058 aa17.99■□□□□ 0.47
U2AF1-211ENST00000486519 CCDC96Q2M329 555 aa17.99■□□□□ 0.47
U2AF1-211ENST00000486519 DHX37Q8IY37 1157 aaKnown RBP17.99■□□□□ 0.47
U2AF1-211ENST00000486519 SPPL3Q8TCT6 385 aa17.99■□□□□ 0.47
U2AF1-211ENST00000486519 COL20A1Q9P218 1284 aa17.99■□□□□ 0.47
U2AF1-211ENST00000486519 PER2O15055 1255 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 TREHO43280 583 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 IFIT2P09913 472 aaKnown RBP17.98■□□□□ 0.47
U2AF1-211ENST00000486519 ATP5JP18859 108 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 GIMAP6Q6P9H5 292 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 KIAA2013Q8IYS2 634 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 KREMEN2Q8NCW0 462 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 365.5 ms