RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PCDHGA7Q9Y5G6 932 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 PCDHGA6Q9Y5G7 932 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 PCDHGA3Q9Y5H0 932 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 PCDHGA2Q9Y5H1 932 aa6.74□□□□□ -1.33
COPA-203ENST00000481040 TRIM75PA6NK02 468 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 GSTA4O15217 222 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 TGM5O43548 720 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 FGAP02671 866 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 IFNGR1P15260 489 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 NOP2P46087 812 aaKnown RBP6.73□□□□□ -1.33
COPA-203ENST00000481040 SEPHS1P49903 392 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 ST5P78524 1137 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 HTRA3P83110 453 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 GALEQ14376 348 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 LRRC32Q14392 662 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 ARHGAP44Q17R89 818 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 INO80DQ53TQ3 878 aaPredicted RBP6.73□□□□□ -1.33
COPA-203ENST00000481040 GPR158Q5T848 1215 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 DZIP1LQ8IYY4 767 aaKnown RBP6.73□□□□□ -1.33
COPA-203ENST00000481040 AGGF1Q8N302 714 aaeCLIP6.73□□□□□ -1.33
COPA-203ENST00000481040 CISD2Q8N5K1 135 aaKnown RBP6.73□□□□□ -1.33
COPA-203ENST00000481040 C2orf69Q8N8R5 385 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 DTWD2Q8NBA8 298 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 RUNDC1Q96C34 613 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 FCRL3Q96P31 734 aaPredicted RBP6.73□□□□□ -1.33
COPA-203ENST00000481040 ELAC2Q9BQ52 826 aaKnown RBP6.73□□□□□ -1.33
COPA-203ENST00000481040 IPPKQ9H8X2 491 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 PPCSQ9HAB8 311 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 LGR6Q9HBX8 967 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 SAP30BPQ9UHR5 308 aaKnown RBP6.73□□□□□ -1.33
COPA-203ENST00000481040 KCNH3Q9ULD8 1083 aa6.73□□□□□ -1.33
COPA-203ENST00000481040 TPX2Q9ULW0 747 aaKnown RBP6.73□□□□□ -1.33
COPA-203ENST00000481040 F8W735 103 aaPredicted RBP6.72□□□□□ -1.33
COPA-203ENST00000481040 XPOTO43592 962 aaKnown RBP6.72□□□□□ -1.33
COPA-203ENST00000481040 HYAL3O43820 417 aaPredicted RBP6.72□□□□□ -1.33
COPA-203ENST00000481040 NRDCO43847 1150 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 EOMESO95936 686 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 HSPA6P17066 643 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 USP11P51784 963 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 SCAND1P57086 179 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 RBM10P98175 930 aaKnown RBP6.72□□□□□ -1.33
COPA-203ENST00000481040 LRP8Q14114 963 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 EFCAB2Q5VUJ9 269 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 IQCEQ6IPM2 695 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 C16orf59Q7L2K0 433 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 OTOP1Q7RTM1 612 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 CMIPQ8IY22 773 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 RCBTB1Q8NDN9 531 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 Q96M66 194 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 SEMA6CQ9H3T2 930 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 DDX21Q9NR30 783 aaKnown RBP eCLIP6.72□□□□□ -1.33
COPA-203ENST00000481040 GPATCH2Q9NW75 528 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 PUF60Q9UHX1 559 aaKnown RBP6.72□□□□□ -1.33
COPA-203ENST00000481040 CNTNAP4Q9C0A0 1308 aa6.72□□□□□ -1.33
COPA-203ENST00000481040 KLHL33A6NCF5 533 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 RASSF10A6NK89 507 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 FAM47E-STBD1D6RA91 191 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 NFICP08651 508 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 GRK2P25098 689 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 SERPINB3P29508 390 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 ZNF280AP59817 542 aaPredicted RBP6.71□□□□□ -1.34
COPA-203ENST00000481040 RAPGEF1Q13905 1077 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 TERF2Q15554 542 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 FAM83BQ5T0W9 1011 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 CYB5RLQ6IPT4 315 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 CDPF1Q6NVV7 123 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 ERAP2Q6P179 960 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 PRR23CQ6ZRP0 262 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 Q6ZS46 218 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 RASSF3Q86WH2 238 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 AMOTL1Q8IY63 956 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 PANK1Q8TE04 598 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 COX4I2Q96KJ9 171 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 AKTIPQ9H8T0 292 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 NMRK2Q9NPI5 230 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 C1orf112Q9NSG2 853 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 TERF2IPQ9NYB0 399 aa6.71□□□□□ -1.34
COPA-203ENST00000481040 GOLGA8AA7E2F4 631 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 GOLGA8BA8MQT2 603 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 H7C1D1 291 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 PMM2O15305 246 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 H2AFYO75367 372 aaKnown RBP6.7□□□□□ -1.34
COPA-203ENST00000481040 ZRANB2O95218 330 aaKnown RBP eCLIP6.7□□□□□ -1.344e-6■□□□□ 8.7
COPA-203ENST00000481040 GPR3P46089 330 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 PREPP48147 710 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 RRP12Q5JTH9 1297 aaKnown RBP6.7□□□□□ -1.34
COPA-203ENST00000481040 IFIT1BQ5T764 474 aaKnown RBP6.7□□□□□ -1.34
COPA-203ENST00000481040 EEF1DP3Q658K8 133 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
COPA-203ENST00000481040 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 B3GNT9Q6UX72 402 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 TOGARAM2Q6ZUX3 1019 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 TOP6BLQ8N6T0 577 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 ENAHQ8N8S7 591 aaPredicted RBP6.7□□□□□ -1.34
COPA-203ENST00000481040 ENOX1Q8TC92 643 aaKnown RBP6.7□□□□□ -1.34
COPA-203ENST00000481040 MMP19Q99542 508 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 SLC12A9Q9BXP2 914 aa6.7□□□□□ -1.34
COPA-203ENST00000481040 HDAC8Q9BY41 377 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms