RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 KLHL7Q8IXQ5 586 aa15.12■□□□□ 0.01
BRAT1-203ENST00000467558 POTEMA6NI47 508 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 EFCAB8A8MWE9 144 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 MAP3K9P80192 1104 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 CEP128Q6ZU80 1094 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 ARMC9Q7Z3E5 817 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 TSNARE1Q96NA8 513 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 NSRP1Q9H0G5 558 aaKnown RBP15.11■□□□□ 0.01
BRAT1-203ENST00000467558 ANAPC4Q9UJX5 808 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 BCL9O00512 1426 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 NWD1Q149M9 1564 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 PVALEFA0A1B0GWK0 134 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 ABCD1P33897 745 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
BRAT1-203ENST00000467558 TCP11X2Q5H9J9 407 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 MIS18BP1Q6P0N0 1132 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 FERP16591 822 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 FGFR2P21802 821 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 SEMA3FQ13275 785 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 KRT31Q15323 416 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 RNF207Q6ZRF8 634 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 FAM76AQ8TAV0 307 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 NDST4Q9H3R1 872 aa15.11■□□□□ 0.01
BRAT1-203ENST00000467558 ERCC6LQ2NKX8 1250 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 HACE1Q8IYU2 909 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 KMT5AQ9NQR1 393 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 FEZ2Q9UHY8 353 aaPredicted RBP15.1■□□□□ 0.01
BRAT1-203ENST00000467558 SHPRHQ149N8 1683 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 MYL7Q01449 175 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 NBPF11Q86T75 865 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 PPP1R14CQ8TAE6 165 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 MAIP1Q8WWC4 291 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 PANX2Q96RD6 677 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 PHF20Q9BVI0 1012 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 GPR75-ASB3A0A0A6YYF3 556 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 TNNC2P02585 160 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 PPP4CP60510 307 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 PPP2R5EQ16537 467 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 PRPF38AQ8NAV1 312 aaKnown RBP15.1■□□□□ 0.01
BRAT1-203ENST00000467558 PDE6CP51160 858 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 GOLGA8FQ08AF8 430 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 GOLGA8DPQ0D2H9 430 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 ALCAMQ13740 583 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 BRD3Q15059 726 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 PTPN21Q16825 1174 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 SEPT14Q6ZU15 432 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 C16orf86Q6ZW13 317 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 ZNF354CQ86Y25 554 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 TMEM260Q9NX78 707 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 ZNRF3Q9ULT6 936 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 USTQ9Y2C2 406 aa15.1■□□□□ 0.01
BRAT1-203ENST00000467558 CLIC2O15247 247 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 TMEM191BP0C7N4 346 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 FDPSP14324 419 aaKnown RBP15.09■□□□□ 0.01
BRAT1-203ENST00000467558 DPP9Q86TI2 863 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 ANKRD13CQ8N6S4 541 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 NT5C1BQ96P26 610 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 KCNK3O14649 394 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 USP11P51784 963 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 TFDP1Q14186 410 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 CCDC170Q8IYT3 715 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 ABCB11O95342 1321 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 SMIM23A6NLE4 172 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 BUB1O43683 1085 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 ENTPD3O75355 529 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 RASA1P20936 1047 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 CASP1P29466 404 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 BPIFB4P59827 614 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 ZNF543Q08ER8 600 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 CTTNQ14247 550 aaKnown RBP15.09■□□□□ 0.01
BRAT1-203ENST00000467558 EXOC8Q8IYI6 725 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 WRNIP1Q96S55 665 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 MAP3K14Q99558 947 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 TRIM31Q9BZY9 425 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 ASIC3Q9UHC3 531 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 CDC23Q9UJX2 597 aa15.09■□□□□ 0.01
BRAT1-203ENST00000467558 A0A0G2JLW4 131 aa15.08■□□□□ 0.01
BRAT1-203ENST00000467558 RGL2O15211 777 aa15.08■□□□□ 0.01
BRAT1-203ENST00000467558 PSAPP07602 524 aa15.08■□□□□ 0.01
BRAT1-203ENST00000467558 CCDC105Q8IYK2 499 aa15.08■□□□□ 0.01
BRAT1-203ENST00000467558 RMDN3Q96TC7 470 aa15.08■□□□□ 0.01
BRAT1-203ENST00000467558 HOXC10Q9NYD6 342 aa15.08■□□□□ 0.01
BRAT1-203ENST00000467558 FBXO2Q9UK22 296 aaPredicted RBP15.08■□□□□ 0.01
BRAT1-203ENST00000467558 CTDNEP1O95476 244 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 FDX1P10109 184 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 LMNB1P20700 586 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 MFAP3P55082 362 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 DNAJC21Q5F1R6 531 aaKnown RBP15.08■□□□□ 0
BRAT1-203ENST00000467558 POTEDQ86YR6 584 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 PAIP2Q9BPZ3 127 aaKnown RBP15.08■□□□□ 0
BRAT1-203ENST00000467558 SELENOSQ9BQE4 189 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 ANKFY1Q9P2R3 1169 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 ZHX2Q9Y6X8 837 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 ZEB2O60315 1214 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 IPO4Q8TEX9 1081 aaKnown RBP15.08■□□□□ 0
BRAT1-203ENST00000467558 PDLIM2Q96JY6 352 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 UBR1Q8IWV7 1749 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 GYS1P13807 737 aa15.08■□□□□ 0
BRAT1-203ENST00000467558 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms