RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 RGL3Q3MIN7 710 aa5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 SGO2Q562F6 1265 aa5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 OTOP1Q7RTM1 612 aa5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 TMTC2Q8N394 836 aa5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 STRBPQ96SI9 672 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 NUP88Q99567 741 aaPredicted RBP5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 TRIM75PA6NK02 468 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 PRR33A8MZF0 331 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 GAS2O43903 313 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 KRT37O76014 449 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 PTMSP20962 102 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 GRK2P25098 689 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 GRK3P35626 688 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 NOP2P46087 812 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 GPR3P46089 330 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 HTR3AP46098 478 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 TERF2Q15554 542 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 EEF1DP3Q658K8 133 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 C16orf59Q7L2K0 433 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 KSR1Q8IVT5 923 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 TMEM130Q8N3G9 435 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 EZH1Q92800 747 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 RUNDC1Q96C34 613 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 MAN1C1Q9NR34 630 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 C1GALT1Q9NS00 363 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 CATSPERZQ9NTU4 200 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 GPATCH2Q9NW75 528 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 PNMA2Q9UL42 364 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 ANO9A1A5B4 782 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 LCHNA4D1U4 455 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 FAM47E-STBD1D6RA91 191 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 GSTA4O15217 222 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 SART1O43290 800 aaKnown RBP5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 VAV1P15498 845 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 PHKG2P15735 406 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 PDE6AP16499 860 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 SLC9A1P19634 815 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 BMP8BP34820 402 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 CLUL1Q15846 466 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 SFRP5Q5T4F7 317 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 SPTY2D1Q68D10 685 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 RCSD1Q6JBY9 416 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 ERAP2Q6P179 960 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 B3GNT9Q6UX72 402 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 FAM9BQ8IZU0 186 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 LMBR1Q8WVP7 490 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 TCTN2Q96GX1 697 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 PLVAPQ9BX97 442 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 CDIP1Q9H305 208 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 PRDM5Q9NQX1 630 aaPredicted RBP5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 INVSQ9Y283 1065 aa5.14□□□□□ -1.59
CDC42BPA-207ENST00000441725 NPHP3-ACAD11A0A0J9YXS1 232 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 KLHL33A6NCF5 533 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 PMM2O15305 246 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 ELNP15502 786 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 TNK2Q07912 1038 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 ZNF267Q14586 743 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 PDCD1Q15116 288 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 ARHGAP44Q17R89 818 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 INO80DQ53TQ3 878 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 RRP12Q5JTH9 1297 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 FAM83BQ5T0W9 1011 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 GPR158Q5T848 1215 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 EFCAB2Q5VUJ9 269 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 IQCEQ6IPM2 695 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 FSTL4Q6MZW2 842 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 LINC00114Q6XXX2 140 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 RASSF3Q86WH2 238 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 ZNF655Q8N720 491 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 GPATCH11Q8N954 259 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 DAGLBQ8NCG7 672 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 SLC35G2Q8TBE7 412 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 PARD3BQ8TEW8 1205 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 SECISBP2LQ93073 1101 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 COX4I2Q96KJ9 171 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 TEKT5Q96M29 485 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 MMP19Q99542 508 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 KCNJ15Q99712 375 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 ELAC2Q9BQ52 826 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 NMRK2Q9NPI5 230 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 DDX21Q9NR30 783 aaKnown RBP eCLIP5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 ZNF652Q9Y2D9 606 aa5.13□□□□□ -1.59
CDC42BPA-207ENST00000441725 GOLGA8AA7E2F4 631 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 GOLGA8BA8MQT2 603 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 KCNK3O14649 394 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 WDHD1O75717 1129 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 GSTM1P09488 218 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 ZBTB48P10074 688 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 MYBP10242 640 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 GLB1P16278 677 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 PAMP19021 973 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 TRAPPC10P48553 1259 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 USP14P54578 494 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 SMAD3P84022 425 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 SMAD2Q15796 467 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 CRY1Q16526 586 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 CLEC16AQ2KHT3 1053 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 RTP2Q5QGT7 225 aa5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 IFIT1BQ5T764 474 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-207ENST00000441725 OSTM1Q86WC4 334 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms