RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ATP6V0A2Q9Y487 856 aa6.27□□□□□ -1.41
RFC3-202ENST00000434425 PDE4DIPQ5VU43 2346 aa6.27□□□□□ -1.41
RFC3-202ENST00000434425 ANO9A1A5B4 782 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 TRIM64A6NGJ6 449 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 TRIM64BA6NI03 449 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 GRK2P25098 689 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 STAT3P40763 770 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 EPS15P42566 896 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 RGS19P49795 217 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 PAPOLAP51003 745 aaKnown RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 CSE1LP55060 971 aaKnown RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 PLIN5Q00G26 463 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 MLLT1Q03111 559 aaPredicted RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 STK3Q13188 491 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 GRM1Q13255 1194 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 HLFQ16534 295 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 PREPLQ4J6C6 727 aaPredicted RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 LRCH2Q5VUJ6 765 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 EEPD1Q7L9B9 569 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 OTOP3Q7RTS5 596 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 SLC51AQ86UW1 340 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 NBPF15Q8N660 670 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 LILRB1Q8NHL6 650 aaPredicted RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 FAM81BQ96LP2 452 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 UIMC1Q96RL1 719 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 BAG1Q99933 345 aaPredicted RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 ELAC2Q9BQ52 826 aaKnown RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 TCHPQ9BT92 498 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 MAK16Q9BXY0 300 aaKnown RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 NCOA5Q9HCD5 579 aaKnown RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 TCF7L2Q9NQB0 619 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 EXOC1Q9NV70 894 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 PPARGC1AQ9UBK2 798 aaKnown RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 ZNF112Q9UJU3 913 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 BARX2Q9UMQ3 279 aaPredicted RBP6.26□□□□□ -1.41
RFC3-202ENST00000434425 KIAA1024Q9UPX6 916 aa6.26□□□□□ -1.41
RFC3-202ENST00000434425 NIP7Q9Y221 180 aaKnown RBP eCLIP6.26□□□□□ -1.41
RFC3-202ENST00000434425 TRPM7Q96QT4 1865 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 BCORQ6W2J9 1755 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 F8VZ95 297 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 TRAF5O00463 557 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 SPTLC2O15270 562 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 NEMFO60524 1076 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 AOC2O75106 756 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 DKK1O94907 266 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 GALNSP34059 522 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 PRPHP41219 470 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 MAN2A2P49641 1150 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 MRE11P49959 708 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 GTF2A2P52657 109 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 RAC1P63000 192 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 SARNPP82979 210 aaKnown RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 LRRC74AQ0VAA2 488 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 MRPL28Q13084 256 aaKnown RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 PAK2Q13177 524 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 PPP2R5CQ13362 524 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 TAF1CQ15572 869 aaPredicted RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 ELF2Q15723 593 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 OCLNQ16625 522 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 RABL6Q3YEC7 729 aaPredicted RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 GALNT17Q6IS24 598 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 ANKS3Q6ZW76 656 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 LRRC49Q8IUZ0 686 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 TRIM22Q8IYM9 498 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 ZNF511Q8NB15 262 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 HDAC7Q8WUI4 952 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 RTF1Q92541 710 aaKnown RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 GPRASP2Q96D09 838 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 ASIC4Q96FT7 647 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 CRELD1Q96HD1 420 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 CAPNS2Q96L46 248 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 PPM1MQ96MI6 270 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 ZMAT2Q96NC0 199 aaKnown RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 TSGA13Q96PP4 275 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 SLC7A5P2Q9GIP4 190 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 CNNM2Q9H8M5 875 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 ALG13Q9NP73 1137 aaKnown RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 OBP2AQ9NY56 170 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 CXXC1Q9P0U4 656 aaPredicted RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 BLOC1S6Q9UL45 172 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.25□□□□□ -1.41
RFC3-202ENST00000434425 DNMT3AQ9Y6K1 912 aaPredicted RBP6.25□□□□□ -1.41
RFC3-202ENST00000434425 LTBP1Q14766 1721 aa6.25□□□□□ -1.41
RFC3-202ENST00000434425 COL4A5P29400 1685 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 CEMIPQ8WUJ3 1361 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 E2F8A0AVK6 867 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 FAM221AA4D161 298 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 MUSKO15146 869 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 ZBTB7BO15156 539 aaPredicted RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 USP2O75604 605 aaPredicted RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 KRT38O76015 456 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 SNRPA1P09661 255 aaKnown RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 CTSHP09668 335 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 MYCLP1P12525 358 aaPredicted RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 CNGA1P29973 690 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 SCNN1DP51172 638 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 TPD52P55327 224 aaPredicted RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 EIF6P56537 245 aaKnown RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 DPYDQ12882 1025 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 TRDNQ13061 729 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms