RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 GCFC2P16383 781 aaKnown RBP18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 ATL3Q6DD88 541 aa18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 MOXD1Q6UVY6 613 aa18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 CRYGNQ8WXF5 182 aa18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 XPNPEP3Q9NQH7 507 aa18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 KIAA1217Q5T5P2 1943 aa18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 FAM205CA6NFA0 338 aa18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 DUSP11O75319 330 aaKnown RBP18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 ZNF76P36508 570 aa18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 PDE4DQ08499 809 aa18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 ORC2Q13416 577 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 STXBP2Q15833 593 aa18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 LETM2Q2VYF4 491 aa18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 GJC2Q5T442 439 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 ZNF396Q96N95 335 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 LRRC37A2A6NM11 1700 aa18.75■□□□□ 0.59
TSPAN4-208ENST00000409531 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 MYCLP12524 364 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 EDNRBP24530 442 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 CIITAP33076 1130 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 LRRC41Q15345 812 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 TTC38Q5R3I4 469 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 IQSEC1Q6DN90 963 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 PPP4R3AQ6IN85 833 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 EEPD1Q7L9B9 569 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 RNF180Q86T96 592 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 VSIG10LQ86VR7 867 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 VTA1Q9NP79 307 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 DDX49Q9Y6V7 483 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 KBTBD13C9JR72 458 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 CCNT1O60563 726 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 EIF3JO75822 258 aaKnown RBP18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 PGK1P00558 417 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 ATP2B1P20020 1258 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 TNFAIP2Q03169 654 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 TAPT1Q6NXT6 567 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 IL31RAQ8NI17 732 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 SENP6Q9GZR1 1112 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 CEP131Q9UPN4 1083 aa18.74■□□□□ 0.59
TSPAN4-208ENST00000409531 CYP3A7-CYP3A51PA0A087WV96 503 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 EVI5O60447 810 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 BMP15O95972 392 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 CYP3A7P24462 503 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 TOB1P50616 345 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 SETQ01105 290 aaPredicted RBP18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 GNPTABQ3T906 1256 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 CEP55Q53EZ4 464 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 NIPA1Q7RTP0 329 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 NLRX1Q86UT6 975 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 PDGFCQ9NRA1 345 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 CFAP45Q9UL16 551 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 NR2E3Q9Y5X4 410 aa18.73■□□□□ 0.59
TSPAN4-208ENST00000409531 ADCY6O43306 1168 aa18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 ADAMTS4O75173 837 aa18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 ADCYAP1R1P41586 468 aa18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 FXR1P51114 621 aaKnown RBP eCLIP18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 KRT85P78386 507 aa18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 MRPS9P82933 396 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 FAM173BQ6P4H8 233 aa18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 FBXO16Q8IX29 292 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 LENG1Q96BZ8 264 aaPredicted RBP18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 CDHR1Q96JP9 859 aa18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 MXRA8Q9BRK3 442 aa18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 SPC25Q9HBM1 224 aa18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 DDX25Q9UHL0 483 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-208ENST00000409531 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 MAFGO15525 162 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 NEMFO60524 1076 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 MCM7P33993 719 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 GJA9P57773 515 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 Q4G0T1 1027 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 KLHDC9Q8NEP7 349 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 GPRASP2Q96D09 838 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 MBOAT7Q96N66 472 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 INPP4AQ96PE3 977 aaPredicted RBP18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 TSEN34Q9BSV6 310 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 POLR3EQ9NVU0 708 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 PCDHB6Q9Y5E3 794 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 UBIAD1Q9Y5Z9 338 aa18.71■□□□□ 0.59
TSPAN4-208ENST00000409531 SYNRGQ9UMZ2 1314 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 FAM86B1E9PN63 330 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 MEIS1O00470 390 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 LAD1O00515 517 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 TDP2O95551 362 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 FAM86B2P0C5J1 330 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 SMPD1P17405 629 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 NKX3-2P78367 333 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 MTMR1Q13613 665 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 ZNF174Q15697 407 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 FOXD4L6Q3SYB3 417 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 PRR16Q569H4 304 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 KCNV1Q6PIU1 500 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 FOXD4L3Q6VB84 417 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 PLA2G4DQ86XP0 818 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 UPF3AQ9H1J1 476 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 JADE2Q9NQC1 790 aa18.7■□□□□ 0.58
TSPAN4-208ENST00000409531 RTEL1Q9NZ71 1219 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms