RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ZNF280CQ8ND82 737 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 CCDC112Q8NEF3 446 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 TRIM47Q96LD4 638 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 RPAP3Q9H6T3 665 aaPredicted RBP27.91■■■□□ 2.06
CTSA-203ENST00000372459 BMP2KQ9NSY1 1161 aaPredicted RBP27.91■■■□□ 2.06
CTSA-203ENST00000372459 SBF1O95248 1867 aa27.91■■■□□ 2.06
CTSA-203ENST00000372459 MED24O75448 989 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 HIRAP54198 1017 aaPredicted RBP27.9■■■□□ 2.06
CTSA-203ENST00000372459 PMS1P54277 932 aaKnown RBP27.9■■■□□ 2.06
CTSA-203ENST00000372459 MCF2L2Q86YR7 1114 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 NOC3LQ8WTT2 800 aaKnown RBP27.9■■■□□ 2.06
CTSA-203ENST00000372459 P2RX5Q93086 422 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 THAP9Q9H5L6 903 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 PNMA2Q9UL42 364 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 RABGAP1Q9Y3P9 1069 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 GTF2F1P35269 517 aaKnown RBP eCLIP27.9■■■□□ 2.066e-6■■■■□ 21.5
CTSA-203ENST00000372459 TTI2Q6NXR4 508 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 KIAA0895Q8NCT3 520 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 VAV3Q9UKW4 847 aa27.9■■■□□ 2.06
CTSA-203ENST00000372459 CTDP1Q9Y5B0 961 aaPredicted RBP27.9■■■□□ 2.06
CTSA-203ENST00000372459 E9PMD0 336 aa27.89■■■□□ 2.06
CTSA-203ENST00000372459 TEX33O43247 280 aa27.89■■■□□ 2.06
CTSA-203ENST00000372459 PLA2G4BP0C869 781 aa27.89■■■□□ 2.06
CTSA-203ENST00000372459 FDX1P10109 184 aa27.89■■■□□ 2.06
CTSA-203ENST00000372459 IDEP14735 1019 aa27.89■■■□□ 2.06
CTSA-203ENST00000372459 RPA1P27694 616 aa27.89■■■□□ 2.06
CTSA-203ENST00000372459 PSMD2Q13200 908 aa27.89■■■□□ 2.06
CTSA-203ENST00000372459 SLC39A2Q9NP94 309 aa27.89■■■□□ 2.06
CTSA-203ENST00000372459 SUPT20HL1Q3ZLR7 823 aa27.88■■■□□ 2.05
CTSA-203ENST00000372459 CATSPER3Q86XQ3 398 aa27.88■■■□□ 2.05
CTSA-203ENST00000372459 CPXCR1Q8N123 301 aa27.88■■■□□ 2.05
CTSA-203ENST00000372459 KLRG1Q96E93 195 aa27.88■■■□□ 2.05
CTSA-203ENST00000372459 ZBED4O75132 1171 aa27.88■■■□□ 2.05
CTSA-203ENST00000372459 SSBP05455 408 aaKnown RBP eCLIP27.88■■■□□ 2.05
CTSA-203ENST00000372459 CEP55Q53EZ4 464 aa27.88■■■□□ 2.05
CTSA-203ENST00000372459 CLEC4DQ8WXI8 215 aa27.88■■■□□ 2.05
CTSA-203ENST00000372459 RAVER2Q9HCJ3 691 aaKnown RBP27.88■■■□□ 2.05
CTSA-203ENST00000372459 EEF1GP26641 437 aaKnown RBP27.87■■■□□ 2.05
CTSA-203ENST00000372459 KCNJ6P48051 423 aa27.87■■■□□ 2.05
CTSA-203ENST00000372459 COPB1P53618 953 aaKnown RBP27.87■■■□□ 2.05
CTSA-203ENST00000372459 UBXN2AP68543 259 aa27.87■■■□□ 2.05
CTSA-203ENST00000372459 SETQ01105 290 aaPredicted RBP27.87■■■□□ 2.05
CTSA-203ENST00000372459 GHRHRQ02643 423 aa27.87■■■□□ 2.05
CTSA-203ENST00000372459 DNAJC19Q96DA6 116 aa27.87■■■□□ 2.05
CTSA-203ENST00000372459 SRRTQ9BXP5 876 aaKnown RBP27.87■■■□□ 2.05
CTSA-203ENST00000372459 KCND1Q9NSA2 647 aa27.87■■■□□ 2.05
CTSA-203ENST00000372459 PITPNM2Q9BZ72 1349 aa27.87■■■□□ 2.05
CTSA-203ENST00000372459 N4BP3O15049 544 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 ALAS1P13196 640 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 PBX1P40424 430 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 EHHADHQ08426 723 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 SAMD3Q8N6K7 520 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 HPS3Q969F9 1004 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 TMX1Q9H3N1 280 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 MAP3K20Q9NYL2 800 aaKnown RBP27.86■■■□□ 2.05
CTSA-203ENST00000372459 MAGEC2Q9UBF1 373 aaPredicted RBP27.86■■■□□ 2.05
CTSA-203ENST00000372459 POTEFA5A3E0 1075 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 NFIBO00712 420 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 POTEIP0CG38 1075 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 RBM10P98175 930 aaKnown RBP27.86■■■□□ 2.05
CTSA-203ENST00000372459 POTEGQ6S5H5 508 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 POTEEQ6S8J3 1075 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 IRF2BP1Q8IU81 584 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 CREBRFQ8IUR6 639 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 CSGALNACT2Q8N6G5 542 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 FZD1Q9UP38 647 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 ZHX2Q9Y6X8 837 aa27.86■■■□□ 2.05
CTSA-203ENST00000372459 C19orf81C9J6K1 198 aa27.85■■■□□ 2.05
CTSA-203ENST00000372459 DDNO94850 711 aaPredicted RBP27.85■■■□□ 2.05
CTSA-203ENST00000372459 SPATA31C1P0DKV0 1188 aa27.85■■■□□ 2.05
CTSA-203ENST00000372459 ANKRD40Q6AI12 368 aa27.85■■■□□ 2.05
CTSA-203ENST00000372459 GUF1Q8N442 669 aaKnown RBP27.85■■■□□ 2.05
CTSA-203ENST00000372459 SLC5A5Q92911 643 aa27.85■■■□□ 2.05
CTSA-203ENST00000372459 C12orf42Q96LP6 360 aa27.85■■■□□ 2.05
CTSA-203ENST00000372459 DUSP9Q99956 384 aaKnown RBP27.85■■■□□ 2.05
CTSA-203ENST00000372459 POLR3CQ9BUI4 534 aaPredicted RBP27.85■■■□□ 2.05
CTSA-203ENST00000372459 TAB2Q9NYJ8 693 aa27.85■■■□□ 2.05
CTSA-203ENST00000372459 DNM3Q9UQ16 869 aa27.85■■■□□ 2.05
CTSA-203ENST00000372459 NOL9Q5SY16 702 aaKnown RBP27.84■■■□□ 2.05
CTSA-203ENST00000372459 LRCH2Q5VUJ6 765 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 GPBP1Q86WP2 473 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 KCTD17Q8N5Z5 321 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 VPS16Q9H269 839 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 PANK4Q9NVE7 773 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 ITIH6Q6UXX5 1313 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 SSC5DA1L4H1 1573 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 UTRNP46939 3433 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 SLC12A3P55017 1021 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 COASYQ13057 564 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 OTOP1Q7RTM1 612 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 CCDC65Q8IXS2 484 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 ADARB2Q9NS39 739 aaKnown RBP27.84■■■□□ 2.05
CTSA-203ENST00000372459 RNF181Q9P0P0 153 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 RPTORQ8N122 1335 aa27.84■■■□□ 2.05
CTSA-203ENST00000372459 MEIS1O00470 390 aa27.83■■■□□ 2.05
CTSA-203ENST00000372459 PSMD10O75832 226 aa27.83■■■□□ 2.05
CTSA-203ENST00000372459 CYP11B2P19099 503 aa27.83■■■□□ 2.05
CTSA-203ENST00000372459 CENPPQ6IPU0 288 aa27.83■■■□□ 2.05
CTSA-203ENST00000372459 FAM114A1Q8IWE2 563 aa27.83■■■□□ 2.05
CTSA-203ENST00000372459 EIF2AK1Q9BQI3 630 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms