RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MSH4O15457 936 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 ARIH2O95376 493 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 NCLP19338 710 aaKnown RBP28.79■■■□□ 2.2
SSBP3-202ENST00000357475 BCAS3Q9H6U6 928 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 GDPD2Q9HCC8 539 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 POLR3EQ9NVU0 708 aa28.79■■■□□ 2.2
SSBP3-202ENST00000357475 ATP9AO75110 1047 aa28.78■■■□□ 2.2
SSBP3-202ENST00000357475 STAM2O75886 525 aa28.78■■■□□ 2.2
SSBP3-202ENST00000357475 NASPP49321 788 aaPredicted RBP28.78■■■□□ 2.2
SSBP3-202ENST00000357475 NIPA1Q7RTP0 329 aa28.78■■■□□ 2.2
SSBP3-202ENST00000357475 TRPV1Q8NER1 839 aa28.78■■■□□ 2.2
SSBP3-202ENST00000357475 ETNPPLQ8TBG4 499 aa28.78■■■□□ 2.2
SSBP3-202ENST00000357475 HAS1Q92839 578 aa28.78■■■□□ 2.2
SSBP3-202ENST00000357475 NAP1L4Q99733 375 aaKnown RBP28.78■■■□□ 2.2
SSBP3-202ENST00000357475 ZHX1Q9UKY1 873 aaPredicted RBP28.78■■■□□ 2.2
SSBP3-202ENST00000357475 SP2Q02086 613 aa28.77■■■□□ 2.2
SSBP3-202ENST00000357475 ACVR2BQ13705 512 aa28.77■■■□□ 2.2
SSBP3-202ENST00000357475 GPRASP2Q96D09 838 aa28.77■■■□□ 2.2
SSBP3-202ENST00000357475 MTMR9Q96QG7 549 aa28.77■■■□□ 2.2
SSBP3-202ENST00000357475 AGO4Q9HCK5 861 aaKnown RBP28.77■■■□□ 2.2
SSBP3-202ENST00000357475 VTA1Q9NP79 307 aa28.77■■■□□ 2.2
SSBP3-202ENST00000357475 KCNMB3Q9NPA1 279 aa28.77■■■□□ 2.2
SSBP3-202ENST00000357475 PTPN22Q9Y2R2 807 aa28.77■■■□□ 2.2
SSBP3-202ENST00000357475 SPATA31C2B4DYI2 1134 aa28.76■■■□□ 2.19
SSBP3-202ENST00000357475 ZNF865P0CJ78 1059 aaPredicted RBP28.76■■■□□ 2.19
SSBP3-202ENST00000357475 PRMT2P55345 433 aa28.76■■■□□ 2.19
SSBP3-202ENST00000357475 KRT85P78386 507 aa28.76■■■□□ 2.19
SSBP3-202ENST00000357475 CALCRLQ16602 461 aa28.76■■■□□ 2.19
SSBP3-202ENST00000357475 NLRX1Q86UT6 975 aa28.76■■■□□ 2.19
SSBP3-202ENST00000357475 LINC00301Q8NCQ3 95 aa28.76■■■□□ 2.19
SSBP3-202ENST00000357475 ABHD16BQ9H3Z7 469 aa28.76■■■□□ 2.19
SSBP3-202ENST00000357475 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.75■■■□□ 2.19
SSBP3-202ENST00000357475 ADCY6O43306 1168 aa28.75■■■□□ 2.19
SSBP3-202ENST00000357475 FIBPO43427 364 aa28.75■■■□□ 2.19
SSBP3-202ENST00000357475 SORBS3O60504 671 aa28.75■■■□□ 2.19
SSBP3-202ENST00000357475 BAG4O95429 457 aaKnown RBP28.75■■■□□ 2.19
SSBP3-202ENST00000357475 ADCYAP1R1P41586 468 aa28.75■■■□□ 2.19
SSBP3-202ENST00000357475 ATP2C1P98194 919 aaPredicted RBP28.75■■■□□ 2.19
SSBP3-202ENST00000357475 SETQ01105 290 aaPredicted RBP28.75■■■□□ 2.19
SSBP3-202ENST00000357475 ITGB3BPQ13352 177 aaPredicted RBP28.75■■■□□ 2.19
SSBP3-202ENST00000357475 IL17AQ16552 155 aa28.75■■■□□ 2.19
SSBP3-202ENST00000357475 MARCKSP29966 332 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-202ENST00000357475 ICAM3P32942 547 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 CACNB2Q08289 660 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-202ENST00000357475 LY6KQ17RY6 165 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 GNPTABQ3T906 1256 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 MFSD14CQ5VZR4 134 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 ZNF577Q9BSK1 485 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 OR52Z1P0C646 297 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 KCNA2P16389 499 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 ORC2Q13416 577 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-202ENST00000357475 SLC39A14Q15043 492 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 STK38Q15208 465 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 CCDC144BQ3MJ40 725 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 GJC2Q5T442 439 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-202ENST00000357475 ATL3Q6DD88 541 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 CCDC62Q6P9F0 684 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 PXYLP1Q8TE99 480 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 LEO1Q8WVC0 666 aaPredicted RBP28.74■■■□□ 2.19
SSBP3-202ENST00000357475 CFAP45Q9UL16 551 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 TELO2Q9Y4R8 837 aa28.74■■■□□ 2.19
SSBP3-202ENST00000357475 RBM47A0AV96 593 aaKnown RBP28.73■■■□□ 2.19
SSBP3-202ENST00000357475 IPO5O00410 1097 aaKnown RBP28.73■■■□□ 2.19
SSBP3-202ENST00000357475 CYBAP13498 195 aa28.73■■■□□ 2.19
SSBP3-202ENST00000357475 GRIN1Q05586 938 aa28.73■■■□□ 2.19
SSBP3-202ENST00000357475 CTU1Q7Z7A3 348 aaKnown RBP28.73■■■□□ 2.19
SSBP3-202ENST00000357475 TRMT44Q8IYL2 757 aaKnown RBP28.73■■■□□ 2.19
SSBP3-202ENST00000357475 SH3TC2Q8TF17 1288 aa28.73■■■□□ 2.19
SSBP3-202ENST00000357475 COPS5Q92905 334 aa28.73■■■□□ 2.19
SSBP3-202ENST00000357475 SLC5A5Q92911 643 aa28.73■■■□□ 2.19
SSBP3-202ENST00000357475 LENG1Q96BZ8 264 aaPredicted RBP28.73■■■□□ 2.19
SSBP3-202ENST00000357475 BRCA2P51587 3418 aa28.72■■■□□ 2.19
SSBP3-202ENST00000357475 DHX15O43143 795 aaKnown RBP28.72■■■□□ 2.19
SSBP3-202ENST00000357475 YEATS4O95619 227 aa28.72■■■□□ 2.19
SSBP3-202ENST00000357475 HMGCRP04035 888 aa28.72■■■□□ 2.19
SSBP3-202ENST00000357475 PRKAR2AP13861 404 aaKnown RBP28.72■■■□□ 2.19
SSBP3-202ENST00000357475 UBA1P22314 1058 aaKnown RBP28.72■■■□□ 2.19
SSBP3-202ENST00000357475 GRK4P32298 578 aa28.72■■■□□ 2.19
SSBP3-202ENST00000357475 TXKP42681 527 aa28.72■■■□□ 2.19
SSBP3-202ENST00000357475 SLAIN1Q8ND83 568 aa28.72■■■□□ 2.19
SSBP3-202ENST00000357475 DDX41Q9UJV9 622 aaKnown RBP28.72■■■□□ 2.19
SSBP3-202ENST00000357475 RCOR1Q9UKL0 485 aa28.72■■■□□ 2.19
SSBP3-202ENST00000357475 DDX39AO00148 427 aaKnown RBP28.71■■■□□ 2.19
SSBP3-202ENST00000357475 CCND3P30281 292 aaPredicted RBP28.71■■■□□ 2.19
SSBP3-202ENST00000357475 SCFD2Q8WU76 684 aa28.71■■■□□ 2.19
SSBP3-202ENST00000357475 CEP131Q9UPN4 1083 aa28.71■■■□□ 2.19
SSBP3-202ENST00000357475 SPTLC2O15270 562 aa28.7■■■□□ 2.19
SSBP3-202ENST00000357475 INHAP05111 366 aa28.7■■■□□ 2.19
SSBP3-202ENST00000357475 SMPD1P17405 629 aa28.7■■■□□ 2.19
SSBP3-202ENST00000357475 MAP3K21Q5TCX8 1036 aa28.7■■■□□ 2.19
SSBP3-202ENST00000357475 SPATA32Q96LK8 384 aa28.7■■■□□ 2.19
SSBP3-202ENST00000357475 FBXO2Q9UK22 296 aaPredicted RBP28.7■■■□□ 2.19
SSBP3-202ENST00000357475 TBX3O15119 743 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 MARCH6O60337 910 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 PSMD10O75832 226 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 TXNP10599 105 aaKnown RBP28.69■■■□□ 2.18
SSBP3-202ENST00000357475 FAM20AQ96MK3 541 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 VAV3Q9UKW4 847 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 MAFGO15525 162 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 TTLL4Q14679 1199 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms