RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ZNF654Q8IZM8 581 aa22.47■■□□□ 1.19
ITGA4-202ENST00000339307 SMARCC2Q8TAQ2 1214 aa22.47■■□□□ 1.19
ITGA4-202ENST00000339307 SLC9A7Q96T83 725 aa22.47■■□□□ 1.19
ITGA4-202ENST00000339307 SEC63Q9UGP8 760 aaKnown RBP22.47■■□□□ 1.19
ITGA4-202ENST00000339307 MYO9BQ13459 2157 aa22.46■■□□□ 1.19
ITGA4-202ENST00000339307 PPFIA4O75335 1185 aa22.46■■□□□ 1.19
ITGA4-202ENST00000339307 KIF5BP33176 963 aa22.46■■□□□ 1.19
ITGA4-202ENST00000339307 SP2Q02086 613 aa22.46■■□□□ 1.19
ITGA4-202ENST00000339307 HSDL1Q3SXM5 330 aa22.46■■□□□ 1.19
ITGA4-202ENST00000339307 GPKOWQ92917 476 aaPredicted RBP eCLIP22.46■■□□□ 1.19
ITGA4-202ENST00000339307 CUL5Q93034 780 aa22.46■■□□□ 1.19
ITGA4-202ENST00000339307 LY9Q9HBG7 655 aa22.46■■□□□ 1.19
ITGA4-202ENST00000339307 RTEL1Q9NZ71 1219 aa22.46■■□□□ 1.19
ITGA4-202ENST00000339307 TRIP12Q14669 1992 aaPredicted RBP22.46■■□□□ 1.19
ITGA4-202ENST00000339307 UBA1P22314 1058 aaKnown RBP22.45■■□□□ 1.18
ITGA4-202ENST00000339307 MCM5P33992 734 aa22.45■■□□□ 1.18
ITGA4-202ENST00000339307 ZNF200P98182 395 aaPredicted RBP22.45■■□□□ 1.18
ITGA4-202ENST00000339307 GNPTABQ3T906 1256 aa22.45■■□□□ 1.18
ITGA4-202ENST00000339307 DHX38Q92620 1227 aaKnown RBP22.45■■□□□ 1.18
ITGA4-202ENST00000339307 SYMPKQ92797 1274 aaKnown RBP22.45■■□□□ 1.18
ITGA4-202ENST00000339307 CTAGE1Q96RT6 745 aa22.45■■□□□ 1.18
ITGA4-202ENST00000339307 NOP56O00567 594 aaKnown RBP22.44■■□□□ 1.18
ITGA4-202ENST00000339307 DDAH1O94760 285 aa22.44■■□□□ 1.18
ITGA4-202ENST00000339307 F2P00734 622 aa22.44■■□□□ 1.18
ITGA4-202ENST00000339307 TGFB3P10600 412 aa22.44■■□□□ 1.18
ITGA4-202ENST00000339307 CKBP12277 381 aa22.44■■□□□ 1.18
ITGA4-202ENST00000339307 PHOSPHO2Q8TCD6 241 aa22.44■■□□□ 1.18
ITGA4-202ENST00000339307 ZBED2Q9BTP6 218 aa22.44■■□□□ 1.18
ITGA4-202ENST00000339307 TANC1Q9C0D5 1861 aa22.43■■□□□ 1.18
ITGA4-202ENST00000339307 BAIAP3O94812 1187 aa22.43■■□□□ 1.18
ITGA4-202ENST00000339307 RXRAP19793 462 aa22.43■■□□□ 1.18
ITGA4-202ENST00000339307 PTK7Q13308 1070 aa22.43■■□□□ 1.18
ITGA4-202ENST00000339307 RAB11FIP4Q86YS3 637 aa22.43■■□□□ 1.18
ITGA4-202ENST00000339307 HERC6Q8IVU3 1022 aa22.43■■□□□ 1.18
ITGA4-202ENST00000339307 CMTR1Q8N1G2 835 aaKnown RBP22.43■■□□□ 1.18
ITGA4-202ENST00000339307 ANO2Q9NQ90 1003 aa22.43■■□□□ 1.18
ITGA4-202ENST00000339307 HAS3O00219 553 aa22.42■■□□□ 1.18
ITGA4-202ENST00000339307 RFXAPO00287 272 aa22.42■■□□□ 1.18
ITGA4-202ENST00000339307 TJAP1Q5JTD0 557 aa22.42■■□□□ 1.18
ITGA4-202ENST00000339307 USP17L6PQ6QN14 398 aa22.42■■□□□ 1.18
ITGA4-202ENST00000339307 TMTC2Q8N394 836 aa22.42■■□□□ 1.18
ITGA4-202ENST00000339307 LZTS2Q9BRK4 669 aa22.42■■□□□ 1.18
ITGA4-202ENST00000339307 ESYT1Q9BSJ8 1104 aa22.42■■□□□ 1.18
ITGA4-202ENST00000339307 LSG1Q9H089 658 aaKnown RBP22.42■■□□□ 1.18
ITGA4-202ENST00000339307 PRUNE2Q8WUY3 3088 aa22.42■■□□□ 1.18
ITGA4-202ENST00000339307 SLC27A2O14975 620 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 TLL1O43897 1013 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 PARNO95453 639 aaKnown RBP22.41■■□□□ 1.18
ITGA4-202ENST00000339307 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
ITGA4-202ENST00000339307 GNAQP50148 359 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 SP4Q02446 784 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 SKIV2LQ15477 1246 aaKnown RBP22.41■■□□□ 1.18
ITGA4-202ENST00000339307 TMCO2Q7Z6W1 182 aaPredicted RBP22.41■■□□□ 1.18
ITGA4-202ENST00000339307 CCDC82Q8N4S0 544 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 ARNTL2Q8WYA1 636 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 TMEM87BQ96K49 555 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 MAP3K14Q99558 947 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 SPZ1Q9BXG8 430 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 LRRC2Q9BYS8 371 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 BCAS3Q9H6U6 928 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 THEGQ9P2T0 379 aa22.41■■□□□ 1.18
ITGA4-202ENST00000339307 SH2B2O14492 632 aaPredicted RBP22.4■■□□□ 1.18
ITGA4-202ENST00000339307 PLEKHA8P1O95397 391 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 MRPS9P82933 396 aaKnown RBP22.4■■□□□ 1.18
ITGA4-202ENST00000339307 NEDD9Q14511 834 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 ZNF618Q5T7W0 954 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 CREB3L3Q68CJ9 461 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 CNKSR3Q6P9H4 555 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 CYFIP1Q7L576 1253 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 TSPYL2Q9H2G4 693 aaPredicted RBP22.4■■□□□ 1.18
ITGA4-202ENST00000339307 SLC12A7Q9Y666 1083 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 CUL9Q8IWT3 2517 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 C17orf102A2RUQ5 167 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 H3BRB1 525 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 GTPBP6O43824 516 aaPredicted RBP22.4■■□□□ 1.18
ITGA4-202ENST00000339307 NBNO60934 754 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 STAM2O75886 525 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 THPOP40225 353 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 WDR5P61964 334 aaKnown RBP22.4■■□□□ 1.18
ITGA4-202ENST00000339307 IL27Q8NEV9 243 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 C16orf70Q9BSU1 422 aa22.4■■□□□ 1.18
ITGA4-202ENST00000339307 TUT1Q9H6E5 874 aaKnown RBP22.4■■□□□ 1.18
ITGA4-202ENST00000339307 hCG_1642624A0A1W2PR95 340 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 FIBPO43427 364 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 LGALS2P05162 132 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 CALM1P0DP23 149 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 CALM2P0DP24 149 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 CALM3P0DP25 149 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 HOXD8P13378 290 aaPredicted RBP22.39■■□□□ 1.17
ITGA4-202ENST00000339307 GPNMBQ14956 572 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 UTP14CQ5TAP6 766 aaKnown RBP22.39■■□□□ 1.17
ITGA4-202ENST00000339307 SRBD1Q8N5C6 995 aaKnown RBP22.39■■□□□ 1.17
ITGA4-202ENST00000339307 TET1Q8NFU7 2136 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 ATP6V0A1Q93050 837 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 WNT8BQ93098 351 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 MTA3Q9BTC8 594 aa22.39■■□□□ 1.17
ITGA4-202ENST00000339307 SPATA31C2B4DYI2 1134 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 RBAK-RBAKDNI3L0D1 243 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 SMARCA1P28370 1054 aa22.38■■□□□ 1.17
ITGA4-202ENST00000339307 TAP1Q03518 808 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms