RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SERPING1P05155 500 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 KLRK1P26718 216 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 HOXA7P31268 230 aaPredicted RBP18.45■□□□□ 0.54
SSH1-201ENST00000326470 GUCY2FP51841 1108 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 GSCP56915 257 aaPredicted RBP18.45■□□□□ 0.54
SSH1-201ENST00000326470 ORC2Q13416 577 aaPredicted RBP18.45■□□□□ 0.54
SSH1-201ENST00000326470 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 TMC4Q7Z404 712 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 ZNF473Q8WTR7 871 aaKnown RBP18.45■□□□□ 0.54
SSH1-201ENST00000326470 INPP4AQ96PE3 977 aaPredicted RBP18.45■□□□□ 0.54
SSH1-201ENST00000326470 KRT12Q99456 494 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 CEP72Q9P209 647 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 SMCO2A6NFE2 343 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 GNA11P29992 359 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 MDH1P40925 334 aaKnown RBP18.45■□□□□ 0.54
SSH1-201ENST00000326470 LARP4BQ92615 738 aaKnown RBP18.45■□□□□ 0.54
SSH1-201ENST00000326470 DYNLL2Q96FJ2 89 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 CABS1Q96KC9 395 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 C6orf50Q9HD87 102 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 RIC8AQ9NPQ8 531 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 PCDHGC5Q9Y5F6 944 aa18.45■□□□□ 0.54
SSH1-201ENST00000326470 H0YHG0 523 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 TLR2O60603 784 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 MEI1Q5TIA1 1274 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 SFMBT2Q5VUG0 894 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 PNMA5Q96PV4 448 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 SPZ1Q9BXG8 430 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 MKNK2Q9HBH9 465 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 GGA2Q9UJY4 613 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 SPATA31A1Q5TZJ5 1347 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 KLRF2D3W0D1 207 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 MYO1FO00160 1098 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 FTCDO95954 541 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 TSPY3P0CV98 308 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 TSPY8P0CW00 308 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 HSPA9P38646 679 aaKnown RBP18.44■□□□□ 0.54
SSH1-201ENST00000326470 ITGB3BPQ13352 177 aaPredicted RBP18.44■□□□□ 0.54
SSH1-201ENST00000326470 DYMQ7RTS9 669 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 NLRP14Q86W24 1093 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 PROM2Q8N271 834 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 TBCKQ8TEA7 893 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.44■□□□□ 0.541e-6■■■■■ 56.2
SSH1-201ENST00000326470 CCT8L2Q96SF2 557 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 TSG101Q99816 390 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 TMEM47Q9BQJ4 181 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 TANGO6Q9C0B7 1094 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 POLD4Q9HCU8 107 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 NLRC4Q9NPP4 1024 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 MTMR7Q9Y216 660 aa18.44■□□□□ 0.54
SSH1-201ENST00000326470 NOL4O94818 638 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 KLRC1P26715 233 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 TXKP42681 527 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 EHHADHQ08426 723 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 ERFEQ4G0M1 354 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 FAM83BQ5T0W9 1011 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 MYCBPAPQ8TBZ2 947 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 GOLGA8HP0CJ92 632 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 MYBP10242 640 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 ERCC3P19447 782 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 HIBADHP31937 336 aaKnown RBP18.43■□□□□ 0.54
SSH1-201ENST00000326470 ATP6V1AP38606 617 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 DDR1Q08345 913 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 PSMD2Q13200 908 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 EIF1ADQ8N9N8 165 aaKnown RBP18.43■□□□□ 0.54
SSH1-201ENST00000326470 MTMR9Q96QG7 549 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 ATP6V0A2Q9Y487 856 aa18.43■□□□□ 0.54
SSH1-201ENST00000326470 WNK3Q9BYP7 1800 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 FAM107AO95990 144 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 FXR2P51116 673 aaKnown RBP eCLIP18.42■□□□□ 0.54
SSH1-201ENST00000326470 DNA2P51530 1060 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 TNNC1P63316 161 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 TRADDQ15628 312 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 SLC18A3Q16572 532 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 PPP4R3AQ6IN85 833 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 USP38Q8NB14 1042 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 CELF1Q92879 486 aaKnown RBP18.42■□□□□ 0.54
SSH1-201ENST00000326470 STX8Q9UNK0 236 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 RAD51CO43502 376 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 ZPR1O75312 459 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 SEC24CP53992 1094 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 SETQ01105 290 aaPredicted RBP18.42■□□□□ 0.54
SSH1-201ENST00000326470 LRIG3Q6UXM1 1119 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 ZNF444Q8N0Y2 327 aaPredicted RBP18.42■□□□□ 0.54
SSH1-201ENST00000326470 CDK5RAP3Q96JB5 506 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 TAF1DQ9H5J8 278 aaPredicted RBP18.42■□□□□ 0.54
SSH1-201ENST00000326470 TMBIM4Q9HC24 238 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 TMEM59LQ9UK28 342 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 PLAAQ9Y263 795 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 COL4A3BPQ9Y5P4 624 aa18.42■□□□□ 0.54
SSH1-201ENST00000326470 DDB1Q16531 1140 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 CEP85LQ5SZL2 805 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 SOGA3Q5TF21 947 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 TBC1D5Q92609 795 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 RAD54LQ92698 747 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 CPVLQ9H3G5 476 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 PLCB1Q9NQ66 1216 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 A1CFQ9NQ94 594 aaKnown RBP18.41■□□□□ 0.54
SSH1-201ENST00000326470 TFCP2L1Q9NZI6 479 aa18.41■□□□□ 0.54
SSH1-201ENST00000326470 ZNF652Q9Y2D9 606 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms