RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 KRT9P35527 623 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 LONP1P36776 959 aaKnown RBP13.76□□□□□ -0.21
LITAF-221ENST00000622633 PAPOLAP51003 745 aaKnown RBP13.76□□□□□ -0.21
LITAF-221ENST00000622633 UBXN1Q04323 297 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 YTHDF3Q7Z739 585 aaKnown RBP13.76□□□□□ -0.21
LITAF-221ENST00000622633 OSBPL9Q96SU4 736 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 SLF1Q9BQI6 1058 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 MMADHCQ9H3L0 296 aaPredicted RBP13.76□□□□□ -0.21
LITAF-221ENST00000622633 RMND1Q9NWS8 449 aa13.76□□□□□ -0.21
LITAF-221ENST00000622633 TRIM49BA6NDI0 452 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 RNF8O76064 485 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 CDR1P51861 262 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 SPAG1Q07617 926 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
LITAF-221ENST00000622633 IRF2BP1Q8IU81 584 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 CCDC50Q8IVM0 306 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 SCLT1Q96NL6 688 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 CHP1Q99653 195 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 TMEM60Q9H2L4 133 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 ARPP21Q9UBL0 812 aaPredicted RBP13.75□□□□□ -0.21
LITAF-221ENST00000622633 PCDHA4Q9UN74 947 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
LITAF-221ENST00000622633 TRPC6Q9Y210 931 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 GCLCP48506 637 aaPredicted RBP13.75□□□□□ -0.21
LITAF-221ENST00000622633 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
LITAF-221ENST00000622633 ROR2Q01974 943 aaKnown RBP13.75□□□□□ -0.21
LITAF-221ENST00000622633 PPFIA1Q13136 1202 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 SLC10A5Q5PT55 438 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 CYB5D1Q6P9G0 228 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 CYP26C1Q6V0L0 522 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 RASSF8Q8NHQ8 419 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 CAPS2Q9BXY5 557 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 GBP3Q9H0R5 595 aa13.75□□□□□ -0.21
LITAF-221ENST00000622633 USP17L3A6NCW0 530 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 USP17L4A6NCW7 530 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 PARP1P09874 1014 aaKnown RBP13.74□□□□□ -0.21
LITAF-221ENST00000622633 SLC8A1P32418 973 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 SCNN1BP51168 640 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 NAALADL2Q58DX5 795 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 DTHD1Q6ZMT9 781 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 USP17L1Q7RTZ2 530 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 PNMA1Q8ND90 353 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 CORO1CQ9ULV4 474 aaPredicted RBP13.74□□□□□ -0.21
LITAF-221ENST00000622633 H7C1D1 291 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 SLC35G1Q2M3R5 365 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 SPATS2Q86XZ4 545 aaKnown RBP13.74□□□□□ -0.21
LITAF-221ENST00000622633 DZIP1Q86YF9 867 aaKnown RBP13.74□□□□□ -0.21
LITAF-221ENST00000622633 KIAA0825Q8IV33 1275 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 FUKQ8N0W3 1084 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 NLRP3Q96P20 1036 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 ALS2CR12Q96Q35 445 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 DISC1Q9NRI5 854 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 SRP68Q9UHB9 627 aaKnown RBP13.74□□□□□ -0.21
LITAF-221ENST00000622633 THRAP3Q9Y2W1 955 aaKnown RBP13.74□□□□□ -0.21
LITAF-221ENST00000622633 MYH13Q9UKX3 1938 aa13.74□□□□□ -0.21
LITAF-221ENST00000622633 CCDC194A0A1B0GVG4 234 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 A0A1B0GVG6 124 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 LINGO3P0C6S8 592 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 GNGT1P63211 74 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 INF2Q27J81 1249 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.73□□□□□ -0.21
LITAF-221ENST00000622633 ADSSL1Q8N142 457 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 RBM41Q96IZ5 413 aaKnown RBP13.73□□□□□ -0.21
LITAF-221ENST00000622633 CCDC114Q96M63 670 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 NAPGQ99747 312 aaPredicted RBP13.73□□□□□ -0.21
LITAF-221ENST00000622633 IQCGQ9H095 443 aaKnown RBP13.73□□□□□ -0.21
LITAF-221ENST00000622633 ZCWPW1Q9H0M4 648 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 PAPOLBQ9NRJ5 636 aaKnown RBP13.73□□□□□ -0.21
LITAF-221ENST00000622633 COL16A1Q07092 1604 aaPredicted RBP13.73□□□□□ -0.21
LITAF-221ENST00000622633 DBN1Q16643 649 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 C12orf60Q5U649 245 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 MTHFD1LQ6UB35 978 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 SLC51AQ86UW1 340 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 TRIM10Q9UDY6 481 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 MAD2L2Q9UI95 211 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 HPCAL4Q9UM19 191 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 LAMB2P55268 1798 aa13.73□□□□□ -0.21
LITAF-221ENST00000622633 TTC26A0AVF1 554 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
LITAF-221ENST00000622633 RHOXF2BP0C7M4 288 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 UBA7P41226 1012 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 TRIM14Q14142 442 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 DGKHQ86XP1 1220 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 MB21D1Q8N884 522 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 TRIM58Q8NG06 486 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 NSMCE1Q8WV22 266 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 RHOXF2Q9BQY4 288 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 REXO2Q9Y3B8 237 aaKnown RBP13.72□□□□□ -0.21
LITAF-221ENST00000622633 EPN1Q9Y6I3 576 aaPredicted RBP13.72□□□□□ -0.21
LITAF-221ENST00000622633 M0R2N6 131 aa13.72□□□□□ -0.21
LITAF-221ENST00000622633 CYTH3O43739 400 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms