RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 WNK4Q96J92 1243 aa24.11■■□□□ 1.45
SPAST-204ENST00000621856 FAM20AQ96MK3 541 aa24.11■■□□□ 1.45
SPAST-204ENST00000621856 ELP3Q9H9T3 547 aa24.11■■□□□ 1.45
SPAST-204ENST00000621856 PLA2G4DQ86XP0 818 aa24.1■■□□□ 1.45
SPAST-204ENST00000621856 TRERF1Q96PN7 1200 aa24.1■■□□□ 1.45
SPAST-204ENST00000621856 KDM3AQ9Y4C1 1321 aa24.1■■□□□ 1.45
SPAST-204ENST00000621856 PTPRFP10586 1907 aa24.1■■□□□ 1.45
SPAST-204ENST00000621856 CCT6AP40227 531 aaKnown RBP24.1■■□□□ 1.45
SPAST-204ENST00000621856 AMPD3Q01432 767 aa24.1■■□□□ 1.45
SPAST-204ENST00000621856 CNKSR2Q8WXI2 1034 aa24.1■■□□□ 1.45
SPAST-204ENST00000621856 NUDT12Q9BQG2 462 aa24.1■■□□□ 1.45
SPAST-204ENST00000621856 MSH4O15457 936 aa24.09■■□□□ 1.45
SPAST-204ENST00000621856 DHX8Q14562 1220 aaKnown RBP24.09■■□□□ 1.45
SPAST-204ENST00000621856 HS1BP3Q53T59 392 aa24.09■■□□□ 1.45
SPAST-204ENST00000621856 ANKRD13AQ8IZ07 590 aa24.09■■□□□ 1.45
SPAST-204ENST00000621856 SAMD3Q8N6K7 520 aa24.09■■□□□ 1.45
SPAST-204ENST00000621856 CYP2W1Q8TAV3 490 aa24.09■■□□□ 1.45
SPAST-204ENST00000621856 RABGAP1Q9Y3P9 1069 aa24.09■■□□□ 1.45
SPAST-204ENST00000621856 STAT3P40763 770 aa24.08■■□□□ 1.45
SPAST-204ENST00000621856 GHRHRQ02643 423 aa24.08■■□□□ 1.45
SPAST-204ENST00000621856 TMEM119Q4V9L6 283 aa24.08■■□□□ 1.45
SPAST-204ENST00000621856 CT47A1Q5JQC4 288 aaPredicted RBP24.08■■□□□ 1.45
SPAST-204ENST00000621856 SV2BQ7L1I2 683 aa24.08■■□□□ 1.45
SPAST-204ENST00000621856 PNMA8AQ86V59 439 aaPredicted RBP24.08■■□□□ 1.45
SPAST-204ENST00000621856 RNF146Q9NTX7 359 aa24.08■■□□□ 1.45
SPAST-204ENST00000621856 MAP3K20Q9NYL2 800 aaKnown RBP24.08■■□□□ 1.45
SPAST-204ENST00000621856 IGLV3-22A0A075B6J6 115 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 OAZ1P54368 228 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 NCAPH2Q6IBW4 605 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 SNRNP48Q6IEG0 339 aaKnown RBP24.07■■□□□ 1.44
SPAST-204ENST00000621856 MOB2Q70IA6 237 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 DRC7Q8IY82 874 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 SPC24Q8NBT2 197 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 REPS2Q8NFH8 660 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 CCDC47Q96A33 483 aaKnown RBP24.07■■□□□ 1.44
SPAST-204ENST00000621856 OTUD5Q96G74 571 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 HOXC10Q9NYD6 342 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 COL20A1Q9P218 1284 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 ADAMTS5Q9UNA0 930 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 CLEC11AQ9Y240 323 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 SLC26A4O43511 780 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 ERCC5P28715 1186 aaPredicted RBP24.07■■□□□ 1.44
SPAST-204ENST00000621856 FMR1Q06787 632 aaKnown RBP eCLIP24.07■■□□□ 1.44
SPAST-204ENST00000621856 MCM6Q14566 821 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 KLHL10Q6JEL2 608 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.07■■□□□ 1.44
SPAST-204ENST00000621856 ERO1BQ86YB8 467 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 SMYD4Q8IYR2 804 aaPredicted RBP24.07■■□□□ 1.44
SPAST-204ENST00000621856 ERMNQ8TAM6 284 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 SYTL5Q8TDW5 730 aaPredicted RBP24.07■■□□□ 1.44
SPAST-204ENST00000621856 LARP4BQ92615 738 aaKnown RBP24.07■■□□□ 1.44
SPAST-204ENST00000621856 RAD54LQ92698 747 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 CLMNQ96JQ2 1002 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 NT5C3AQ9H0P0 336 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 BLOC1S4Q9NUP1 217 aa24.07■■□□□ 1.44
SPAST-204ENST00000621856 MYPNQ86TC9 1320 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 POTECB2RU33 542 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 PPATQ06203 517 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 KCNB1Q14721 858 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 CEP55Q53EZ4 464 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 ZNF658Q5TYW1 1059 aaPredicted RBP24.06■■□□□ 1.44
SPAST-204ENST00000621856 NSMFQ6X4W1 530 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 GADL1Q6ZQY3 521 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 ARMC9Q7Z3E5 817 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 TRMT44Q8IYL2 757 aaKnown RBP24.06■■□□□ 1.44
SPAST-204ENST00000621856 ENOX1Q8TC92 643 aaKnown RBP24.06■■□□□ 1.44
SPAST-204ENST00000621856 C7orf25Q9BPX7 421 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 TRIM9Q9C026 710 aa24.06■■□□□ 1.44
SPAST-204ENST00000621856 RPTORQ8N122 1335 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 GOLGA6L6A8MZA4 724 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 CD44P16070 742 aaKnown RBP24.05■■□□□ 1.44
SPAST-204ENST00000621856 ASIC1P78348 528 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 KMT5BQ4FZB7 885 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 HYIQ5T013 277 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 HAUS3Q68CZ6 603 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 RNF207Q6ZRF8 634 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 RIPK3Q9Y572 518 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 STK24Q9Y6E0 443 aa24.05■■□□□ 1.44
SPAST-204ENST00000621856 SPDYE16A6NNV3 312 aaPredicted RBP24.04■■□□□ 1.44
SPAST-204ENST00000621856 KLRC4O43908 158 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 CDC25BP30305 580 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 RPS6P62753 249 aaKnown RBP24.04■■□□□ 1.44
SPAST-204ENST00000621856 SETQ01105 290 aaPredicted RBP24.04■■□□□ 1.44
SPAST-204ENST00000621856 SPIRE1Q08AE8 756 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 TMEM132BQ14DG7 1078 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 ECM1Q16610 540 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 SLC30A10Q6XR72 485 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 ZFP91Q96JP5 570 aaPredicted RBP24.04■■□□□ 1.44
SPAST-204ENST00000621856 LRRC27Q9C0I9 530 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 FANCLQ9NW38 375 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 ZNF214Q9UL59 606 aaPredicted RBP24.04■■□□□ 1.44
SPAST-204ENST00000621856 SPDYE5A6NIY4 337 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 PPP1R3GB7ZBB8 358 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 SEMA3FQ13275 785 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 TREML2Q5T2D2 321 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 MRFAP1L1Q96HT8 127 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 VAV3Q9UKW4 847 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 NFE2L3Q9Y4A8 694 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 LOC285556D6RIA3 1793 aa24.04■■□□□ 1.44
SPAST-204ENST00000621856 SYNRGQ9UMZ2 1314 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms