RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SYT10Q6XYQ8 523 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 CSGALNACT2Q8N6G5 542 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 ZBTB21Q9ULJ3 1066 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 PRR12Q9ULL5 1215 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 SMCHD1A6NHR9 2005 aa17.58■□□□□ 0.4
NR1H3-235ENST00000616973 PIK3CDO00329 1044 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 SREBF1P36956 1147 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 ANKRD40Q6AI12 368 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 MB21D1Q8N884 522 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 ANKRD7Q92527 254 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 TSC1Q92574 1164 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
NR1H3-235ENST00000616973 PLA2G6O60733 806 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 CIITAP33076 1130 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 FXR1P51114 621 aaKnown RBP eCLIP17.57■□□□□ 0.4
NR1H3-235ENST00000616973 TGFB2P61812 414 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 MAP3K10Q02779 954 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 UBXN1Q04323 297 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 KCNK18Q7Z418 384 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 DEFB132Q7Z7B7 95 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 GUF1Q8N442 669 aaKnown RBP17.57■□□□□ 0.4
NR1H3-235ENST00000616973 CPLX3Q8WVH0 158 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 P2RX7Q99572 595 aaKnown RBP17.57■□□□□ 0.4
NR1H3-235ENST00000616973 PDCL3Q9H2J4 239 aa17.57■□□□□ 0.4
NR1H3-235ENST00000616973 SPDYE3A6NKU9 549 aa17.56■□□□□ 0.4
NR1H3-235ENST00000616973 DNM2P50570 870 aa17.56■□□□□ 0.4
NR1H3-235ENST00000616973 STAT2P52630 851 aa17.56■□□□□ 0.4
NR1H3-235ENST00000616973 HSP90AA2PQ14568 343 aaPredicted RBP17.56■□□□□ 0.4
NR1H3-235ENST00000616973 ECM1Q16610 540 aa17.56■□□□□ 0.4
NR1H3-235ENST00000616973 TOGARAM2Q6ZUX3 1019 aa17.56■□□□□ 0.4
NR1H3-235ENST00000616973 ETNPPLQ8TBG4 499 aa17.56■□□□□ 0.4
NR1H3-235ENST00000616973 PGAP2Q9UHJ9 254 aa17.56■□□□□ 0.4
NR1H3-235ENST00000616973 STK24Q9Y6E0 443 aa17.56■□□□□ 0.4
NR1H3-235ENST00000616973 OPLAHO14841 1288 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 CYP3A4P08684 503 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 CCDC175P0C221 793 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 ECE1P42892 770 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 SNAP25P60880 206 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 USH1GQ495M9 461 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 TMTC1Q8IUR5 882 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 DDX12PQ92771 950 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 ABHD10Q9NUJ1 306 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 PIM2Q9P1W9 311 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 DYMQ7RTS9 669 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 CREBRFQ8IUR6 639 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 ACER1Q8TDN7 264 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 CHURC1Q8WUH1 139 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 DNAJC19Q96DA6 116 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 FAM20AQ96MK3 541 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 SH2D4AQ9H788 454 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 VCPKMTQ9H867 229 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 SLC39A2Q9NP94 309 aa17.55■□□□□ 0.4
NR1H3-235ENST00000616973 ABCB11O95342 1321 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 SOWAHDA6NJG2 315 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 SLU7O95391 586 aaKnown RBP17.54■□□□□ 0.4
NR1H3-235ENST00000616973 CXCL9Q07325 125 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 RAD9BQ6WBX8 426 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 LENG9Q96B70 501 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 ERO1AQ96HE7 468 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 TUBGCP2Q9BSJ2 902 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 VEZTQ9HBM0 779 aa17.54■□□□□ 0.4
NR1H3-235ENST00000616973 FGFR1OPO95684 399 aaKnown RBP17.53■□□□□ 0.4
NR1H3-235ENST00000616973 CAP2P40123 477 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 LRRC63Q05C16 580 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 SPIRE1Q08AE8 756 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 NCBP1Q09161 790 aaKnown RBP17.53■□□□□ 0.4
NR1H3-235ENST00000616973 HAUS3Q68CZ6 603 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 SPICE1Q8N0Z3 855 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 GJA10Q969M2 543 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 CNOT6LQ96LI5 555 aaKnown RBP17.53■□□□□ 0.4
NR1H3-235ENST00000616973 RANBP17Q9H2T7 1088 aaKnown RBP17.53■□□□□ 0.4
NR1H3-235ENST00000616973 BMP2KQ9NSY1 1161 aaPredicted RBP17.53■□□□□ 0.4
NR1H3-235ENST00000616973 DNAI1Q9UI46 699 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 ADGRG1Q9Y653 693 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 MTF1Q14872 753 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 FAM83BQ5T0W9 1011 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 CIAPIN1Q6FI81 312 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 FAM160B2Q86V87 743 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 RETREG2Q8NC44 543 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 ERMNQ8TAM6 284 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 HPS3Q969F9 1004 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 NUP58Q9BVL2 599 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 TMEM39BQ9GZU3 492 aa17.53■□□□□ 0.4
NR1H3-235ENST00000616973 PRR16Q569H4 304 aa17.52■□□□□ 0.4
NR1H3-235ENST00000616973 CYP26C1Q6V0L0 522 aa17.52■□□□□ 0.4
NR1H3-235ENST00000616973 ZNF215Q9UL58 517 aaPredicted RBP17.52■□□□□ 0.4
NR1H3-235ENST00000616973 CAPN11Q9UMQ6 739 aa17.52■□□□□ 0.4
NR1H3-235ENST00000616973 KIAA1024Q9UPX6 916 aa17.52■□□□□ 0.4
NR1H3-235ENST00000616973 FAM86B1E9PN63 330 aa17.51■□□□□ 0.39
NR1H3-235ENST00000616973 RNF225M0QZC1 329 aaPredicted RBP17.51■□□□□ 0.39
NR1H3-235ENST00000616973 FAM86B2P0C5J1 330 aa17.51■□□□□ 0.39
NR1H3-235ENST00000616973 PLA2G4BP0C869 781 aa17.51■□□□□ 0.39
NR1H3-235ENST00000616973 IDEP14735 1019 aa17.51■□□□□ 0.39
NR1H3-235ENST00000616973 KRT9P35527 623 aa17.51■□□□□ 0.39
NR1H3-235ENST00000616973 COASYQ13057 564 aa17.51■□□□□ 0.39
NR1H3-235ENST00000616973 KCTD17Q8N5Z5 321 aa17.51■□□□□ 0.39
NR1H3-235ENST00000616973 IQCDQ96DY2 449 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms