RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 LRRC55Q6ZSA7 311 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 GSPT2Q8IYD1 628 aaKnown RBP22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 CCDC155Q8N6L0 562 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 RPGRIP1Q96KN7 1286 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 RAB34Q9BZG1 259 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 TSGA10Q9BZW7 698 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 EP400Q96L91 3159 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 LTBP4Q8N2S1 1624 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 LRRC53A6NM62 1247 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 F8W031 263 aaPredicted RBP22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 C6orf229H3BNL8 230 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 GTF2IP78347 998 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 GABPAQ06546 454 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 PDIA5Q14554 519 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 RRAGAQ7L523 313 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 CERKQ8TCT0 537 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 DEF6Q9H4E7 631 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 JMJD4Q9H9V9 463 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 LY75O60449 1722 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 PLIN4Q96Q06 1357 aa22.46■■□□□ 1.19
SHKBP1-225ENST00000600733 FOCADQ5VW36 1801 aa22.45■■□□□ 1.19
SHKBP1-225ENST00000600733 SNHG28P0DPA3 235 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 LRRC63Q05C16 580 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 TTBK2Q6IQ55 1244 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 ADGRF4Q8IZF3 695 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 TBC1D22AQ8WUA7 517 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 TRERF1Q96PN7 1200 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 UIMC1Q96RL1 719 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 HINFPQ9BQA5 517 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 SH2D4AQ9H788 454 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 LRRC4BQ9NT99 713 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 TARSL2A2RTX5 802 aaKnown RBP22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 MOCS3O95396 460 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 MYBL2P10244 700 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 EHHADHQ08426 723 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 TMEM119Q4V9L6 283 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 CCDC84Q86UT8 332 aaPredicted RBP22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 FAM71BQ8TC56 605 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 IQCDQ96DY2 449 aa22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 DDX4Q9NQI0 724 aaKnown RBP22.45■■□□□ 1.18
SHKBP1-225ENST00000600733 USO1O60763 962 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-225ENST00000600733 TRIM58Q8NG06 486 aa22.44■■□□□ 1.18
SHKBP1-225ENST00000600733 HAS1Q92839 578 aa22.44■■□□□ 1.18
SHKBP1-225ENST00000600733 RBM17Q96I25 401 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-225ENST00000600733 SNX12Q9UMY4 172 aa22.44■■□□□ 1.18
SHKBP1-225ENST00000600733 JRKLQ9Y4A0 524 aa22.44■■□□□ 1.18
SHKBP1-225ENST00000600733 AKR1B10O60218 316 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 SERPINB2P05120 415 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 SLC16A2P36021 539 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 ZNF543Q08ER8 600 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 MUM1L1Q5H9M0 696 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 CREG2Q8IUH2 290 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 COG1Q8WTW3 980 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 BAP1Q92560 729 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 RIC8AQ9NPQ8 531 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 DDX25Q9UHL0 483 aaKnown RBP22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 MYH7BA7E2Y1 1941 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 IGKV6D-41A0A0C4DH26 115 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 PNMA6FA0A0J9YX94 578 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 FGFR1OPO95684 399 aaKnown RBP22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 MCM3P25205 808 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 MAP9Q49MG5 647 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 TANGO6Q9C0B7 1094 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 ACBD3Q9H3P7 528 aa22.43■■□□□ 1.18
SHKBP1-225ENST00000600733 ABCB11O95342 1321 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 TACC1O75410 805 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 CAPN2P17655 700 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 PPP4R3AQ6IN85 833 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 FNBP4Q8N3X1 1017 aaPredicted RBP22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 PSMB7Q99436 277 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 VIPAS39Q9H9C1 493 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 MED4Q9NPJ6 270 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 HPCAL4Q9UM19 191 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 RIMBP2O15034 1052 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 LCA5LO95447 670 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 TTLL1O95922 423 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 GYS1P13807 737 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 COASYQ13057 564 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 ANKRD13CQ8N6S4 541 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 DNAJC19Q96DA6 116 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 FGFBP2Q9BYJ0 223 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 PODXL2Q9NZ53 605 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 SALL4Q9UJQ4 1053 aa22.42■■□□□ 1.18
SHKBP1-225ENST00000600733 SYF2O95926 243 aaKnown RBP22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 SLURP2P0DP57 97 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 CLK2P49760 499 aaKnown RBP22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 GOLGA5Q8TBA6 731 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 TBC1D7Q9P0N9 293 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 BBOX1O75936 387 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 SSBP05455 408 aaKnown RBP eCLIP22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 ACTN2P35609 894 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 GFPT1Q06210 699 aaPredicted RBP22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 RAD51AP2Q09MP3 1159 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 KCNMA1Q12791 1236 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 EZH2Q15910 746 aaKnown RBP22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 KCTD1Q719H9 257 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 MYOCDQ8IZQ8 938 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 TSG101Q99816 390 aa22.41■■□□□ 1.18
SHKBP1-225ENST00000600733 FAM204AQ9H8W3 233 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms