RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LRRC27Q9C0I9 530 aa19.91■□□□□ 0.78
RAB40C-203ENST00000535977 C6orf229H3BNL8 230 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 PDE4DQ08499 809 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 TMEM266Q2M3C6 531 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 KRT27Q7Z3Y8 459 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 CSGALNACT2Q8N6G5 542 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 CAPN7Q9Y6W3 813 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 C10orf71Q711Q0 1435 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 ZC3H4Q9UPT8 1303 aaKnown RBP19.9■□□□□ 0.78
RAB40C-203ENST00000535977 FXR2P51116 673 aaKnown RBP eCLIP19.9■□□□□ 0.78
RAB40C-203ENST00000535977 GABPAQ06546 454 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 PDIA5Q14554 519 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 WDR93Q6P2C0 686 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 CABS1Q96KC9 395 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 DAGLAQ9Y4D2 1042 aa19.9■□□□□ 0.78
RAB40C-203ENST00000535977 EPN1Q9Y6I3 576 aaPredicted RBP19.9■□□□□ 0.78
RAB40C-203ENST00000535977 USP17L5A8MUK1 530 aa19.89■□□□□ 0.78
RAB40C-203ENST00000535977 TUBBP07437 444 aa19.89■□□□□ 0.78
RAB40C-203ENST00000535977 SNHG28P0DPA3 235 aa19.89■□□□□ 0.78
RAB40C-203ENST00000535977 SRGNP10124 158 aa19.89■□□□□ 0.78
RAB40C-203ENST00000535977 VAT1LQ9HCJ6 419 aa19.89■□□□□ 0.78
RAB40C-203ENST00000535977 FOCADQ5VW36 1801 aa19.89■□□□□ 0.78
RAB40C-203ENST00000535977 UBR3Q6ZT12 1888 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 PVALEFA0A1B0GWK0 134 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 TRIM49BA6NDI0 452 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 MYO1FO00160 1098 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 PPP1R12AO14974 1030 aaPredicted RBP19.89■□□□□ 0.77
RAB40C-203ENST00000535977 ADCY7P51828 1080 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 ASIC1P78348 528 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 ZNF662Q6ZS27 426 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 SV2BQ7L1I2 683 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 SLC35F6Q8N357 371 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 MIEF2Q96C03 454 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 MTMR9Q96QG7 549 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 NAPGQ99747 312 aaPredicted RBP19.89■□□□□ 0.77
RAB40C-203ENST00000535977 TECP42680 631 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 PMS1P54277 932 aaKnown RBP19.89■□□□□ 0.77
RAB40C-203ENST00000535977 MAP9Q49MG5 647 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 SLC51AQ86UW1 340 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 BCAS4Q8TDM0 211 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 PLIN2Q99541 437 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 TUBGCP2Q9BSJ2 902 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 CD248Q9HCU0 757 aa19.89■□□□□ 0.77
RAB40C-203ENST00000535977 IGKV6D-41A0A0C4DH26 115 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 TTC26A0AVF1 554 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 FGFR1OPO95684 399 aaKnown RBP19.88■□□□□ 0.77
RAB40C-203ENST00000535977 ELF1P32519 619 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 CALCRLQ16602 461 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 WHAMMP3Q1A5X7 153 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-203ENST00000535977 FAM76AQ8TAV0 307 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 DUSP9Q99956 384 aaKnown RBP19.88■□□□□ 0.77
RAB40C-203ENST00000535977 TACO1Q9BSH4 297 aaKnown RBP19.88■□□□□ 0.77
RAB40C-203ENST00000535977 HAUS4Q9H6D7 363 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 BIN2Q9UBW5 565 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-203ENST00000535977 MYH8P13535 1937 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 NDUFA10O95299 355 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 GGCXP38435 758 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 KRT83P78385 493 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 DDR1Q08345 913 aa19.88■□□□□ 0.77
RAB40C-203ENST00000535977 ZNHIT6Q9NWK9 470 aaKnown RBP19.88■□□□□ 0.77
RAB40C-203ENST00000535977 TTLL1O95922 423 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 GTF2IP78347 998 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 NEDD9Q14511 834 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 FIGNQ5HY92 759 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 ACRBPQ8NEB7 543 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 NAP1L4Q99733 375 aaKnown RBP19.87■□□□□ 0.77
RAB40C-203ENST00000535977 CPVLQ9H3G5 476 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 MCM8Q9UJA3 840 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 PNMA6FA0A0J9YX94 578 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 RNF225M0QZC1 329 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-203ENST00000535977 FNTAP49354 379 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 ILDR2Q71H61 639 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 ZKSCAN4Q969J2 545 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-203ENST00000535977 GDAP1L1Q96MZ0 367 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 MMTAG2Q9BU76 263 aaKnown RBP19.87■□□□□ 0.77
RAB40C-203ENST00000535977 UBA5Q9GZZ9 404 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 LRWD1Q9UFC0 647 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 SAMM50Q9Y512 469 aa19.87■□□□□ 0.77
RAB40C-203ENST00000535977 PES1O00541 588 aaKnown RBP19.86■□□□□ 0.77
RAB40C-203ENST00000535977 PPEF1O14829 653 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-203ENST00000535977 MEA1Q16626 185 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 CDK5RAP3Q96JB5 506 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 ATP6V0A2Q9Y487 856 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 BRWD3Q6RI45 1802 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 SHTN1A0MZ66 631 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 ARHGAP25P42331 645 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 TBC1D8BQ0IIM8 1120 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 GPATCH4Q5T3I0 446 aaKnown RBP19.86■□□□□ 0.77
RAB40C-203ENST00000535977 PPP4R3AQ6IN85 833 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 FOXR2Q6PJQ5 311 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 CCDC170Q8IYT3 715 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 EHBP1Q8NDI1 1231 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 LRRC15Q8TF66 581 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 SGSM3Q96HU1 749 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 GLT8D2Q9H1C3 349 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 RIC8AQ9NPQ8 531 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 SERPINB13Q9UIV8 391 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 ABCB11O95342 1321 aa19.86■□□□□ 0.77
RAB40C-203ENST00000535977 LRRC37AA6NMS7 1700 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms