RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 MICALL2Q8IY33 904 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 ANKRD20A12PQ8NF67 263 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 LENG9Q96B70 501 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 LRRC27Q9C0I9 530 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 FEM1BQ9UK73 627 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 PSDA5PKW4 1024 aaPredicted RBP28.95■■■□□ 2.23
COL13A1-214ENST00000522165 FZD9O00144 591 aa28.95■■■□□ 2.23
COL13A1-214ENST00000522165 CCT6AP40227 531 aaKnown RBP28.95■■■□□ 2.23
COL13A1-214ENST00000522165 PRELPP51888 382 aa28.95■■■□□ 2.23
COL13A1-214ENST00000522165 UIMC1Q96RL1 719 aa28.95■■■□□ 2.23
COL13A1-214ENST00000522165 NT5C3AQ9H0P0 336 aa28.95■■■□□ 2.23
COL13A1-214ENST00000522165 COPB1P53618 953 aaKnown RBP28.95■■■□□ 2.22
COL13A1-214ENST00000522165 MYRIPQ8NFW9 859 aa28.95■■■□□ 2.22
COL13A1-214ENST00000522165 THAP9Q9H5L6 903 aa28.95■■■□□ 2.22
COL13A1-214ENST00000522165 ATAD5Q96QE3 1844 aa28.95■■■□□ 2.22
COL13A1-214ENST00000522165 FAM86B1E9PN63 330 aa28.94■■■□□ 2.22
COL13A1-214ENST00000522165 CYP3A4P08684 503 aa28.94■■■□□ 2.22
COL13A1-214ENST00000522165 FAM86B2P0C5J1 330 aa28.94■■■□□ 2.22
COL13A1-214ENST00000522165 SAMD7Q7Z3H4 446 aa28.94■■■□□ 2.22
COL13A1-214ENST00000522165 TRIM47Q96LD4 638 aa28.94■■■□□ 2.22
COL13A1-214ENST00000522165 N4BP3O15049 544 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 CCNE1P24864 410 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 ADKP55263 362 aaKnown RBP28.93■■■□□ 2.22
COL13A1-214ENST00000522165 KIAA0895Q8NCT3 520 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 P2RX5Q93086 422 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 ZNF341Q9BYN7 854 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 DYMQ7RTS9 669 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 NOC3LQ8WTT2 800 aaKnown RBP28.93■■■□□ 2.22
COL13A1-214ENST00000522165 FBXO28Q9NVF7 368 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 TAB2Q9NYJ8 693 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 CNOT7Q9UIV1 285 aaKnown RBP28.93■■■□□ 2.22
COL13A1-214ENST00000522165 GJA3Q9Y6H8 435 aa28.93■■■□□ 2.22
COL13A1-214ENST00000522165 BICDL2A1A5D9 508 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 SPIRE1Q08AE8 756 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 PTPN14Q15678 1187 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 DDX12PQ92771 950 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 DUSP9Q99956 384 aaKnown RBP28.92■■■□□ 2.22
COL13A1-214ENST00000522165 VPS16Q9H269 839 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 ASTN2O75129 1339 aaPredicted RBP28.92■■■□□ 2.22
COL13A1-214ENST00000522165 ITIH6Q6UXX5 1313 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 FCHSD1Q86WN1 690 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 TBC1D5Q92609 795 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 HPS3Q969F9 1004 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 FAM20AQ96MK3 541 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 FEZ1Q99689 392 aa28.92■■■□□ 2.22
COL13A1-214ENST00000522165 BAG1Q99933 345 aaPredicted RBP28.92■■■□□ 2.22
COL13A1-214ENST00000522165 SRRTQ9BXP5 876 aaKnown RBP28.92■■■□□ 2.22
COL13A1-214ENST00000522165 MRPL11Q9Y3B7 192 aaKnown RBP28.92■■■□□ 2.22
COL13A1-214ENST00000522165 CFBP00751 764 aa28.91■■■□□ 2.22
COL13A1-214ENST00000522165 EEF1GP26641 437 aaKnown RBP28.91■■■□□ 2.22
COL13A1-214ENST00000522165 STAT3P40763 770 aa28.91■■■□□ 2.22
COL13A1-214ENST00000522165 PTGER2P43116 358 aa28.91■■■□□ 2.22
COL13A1-214ENST00000522165 TBC1D10BQ4KMP7 808 aaPredicted RBP28.91■■■□□ 2.22
COL13A1-214ENST00000522165 PPP1R13BQ96KQ4 1090 aa28.91■■■□□ 2.22
COL13A1-214ENST00000522165 SLC39A2Q9NP94 309 aa28.91■■■□□ 2.22
COL13A1-214ENST00000522165 AKR1B15C9JRZ8 316 aaPredicted RBP28.9■■■□□ 2.22
COL13A1-214ENST00000522165 GCOM1H8Y6P7 765 aaPredicted RBP28.9■■■□□ 2.22
COL13A1-214ENST00000522165 ARHGAP6O43182 974 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 POLR2MP0CAP2 368 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 GINM1Q9NU53 330 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.9■■■□□ 2.22
COL13A1-214ENST00000522165 HACL1Q9UJ83 578 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 KIAA1024Q9UPX6 916 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 STX10O60499 249 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 CEP135Q66GS9 1140 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 ANKRD40Q6AI12 368 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 PPFIBP1Q86W92 1011 aa28.9■■■□□ 2.22
COL13A1-214ENST00000522165 MSH4O15457 936 aa28.89■■■□□ 2.22
COL13A1-214ENST00000522165 EHHADHQ08426 723 aa28.89■■■□□ 2.22
COL13A1-214ENST00000522165 RBL2Q08999 1139 aa28.89■■■□□ 2.22
COL13A1-214ENST00000522165 CREBRFQ8IUR6 639 aa28.89■■■□□ 2.22
COL13A1-214ENST00000522165 CSGALNACT2Q8N6G5 542 aa28.89■■■□□ 2.22
COL13A1-214ENST00000522165 POTEB3A0JP26 581 aa28.89■■■□□ 2.21
COL13A1-214ENST00000522165 POTECB2RU33 542 aa28.89■■■□□ 2.21
COL13A1-214ENST00000522165 HOXA7P31268 230 aaPredicted RBP28.89■■■□□ 2.21
COL13A1-214ENST00000522165 INPP5BP32019 993 aa28.89■■■□□ 2.21
COL13A1-214ENST00000522165 HAUS3Q68CZ6 603 aa28.89■■■□□ 2.21
COL13A1-214ENST00000522165 POTEBQ6S5H4 581 aa28.89■■■□□ 2.21
COL13A1-214ENST00000522165 LDHDQ86WU2 507 aa28.89■■■□□ 2.21
COL13A1-214ENST00000522165 DNAJC19Q96DA6 116 aa28.89■■■□□ 2.21
COL13A1-214ENST00000522165 PANX2Q96RD6 677 aa28.89■■■□□ 2.21
COL13A1-214ENST00000522165 ABCB11O95342 1321 aa28.88■■■□□ 2.21
COL13A1-214ENST00000522165 E9PMD0 336 aa28.88■■■□□ 2.21
COL13A1-214ENST00000522165 CTNND1O60716 968 aaKnown RBP28.88■■■□□ 2.21
COL13A1-214ENST00000522165 MED24O75448 989 aa28.88■■■□□ 2.21
COL13A1-214ENST00000522165 ZNF76P36508 570 aa28.88■■■□□ 2.21
COL13A1-214ENST00000522165 KIF4BQ2VIQ3 1234 aa28.88■■■□□ 2.21
COL13A1-214ENST00000522165 SAMD1Q6SPF0 538 aaPredicted RBP28.88■■■□□ 2.21
COL13A1-214ENST00000522165 CYP2W1Q8TAV3 490 aa28.88■■■□□ 2.21
COL13A1-214ENST00000522165 DEFB129Q9H1M3 183 aa28.88■■■□□ 2.21
COL13A1-214ENST00000522165 CCP110O43303 1012 aa28.87■■■□□ 2.21
COL13A1-214ENST00000522165 IDEP14735 1019 aa28.87■■■□□ 2.21
COL13A1-214ENST00000522165 PSMD2Q13200 908 aa28.87■■■□□ 2.21
COL13A1-214ENST00000522165 KIAA1683Q9H0B3 1180 aa28.87■■■□□ 2.21
COL13A1-214ENST00000522165 IGLV3-22A0A075B6J6 115 aa28.87■■■□□ 2.21
COL13A1-214ENST00000522165 WDR46O15213 610 aaKnown RBP28.87■■■□□ 2.21
COL13A1-214ENST00000522165 LPAR1Q92633 364 aa28.87■■■□□ 2.21
COL13A1-214ENST00000522165 MAGEC2Q9UBF1 373 aaPredicted RBP28.87■■■□□ 2.21
COL13A1-214ENST00000522165 PAXBP1Q9Y5B6 917 aa28.87■■■□□ 2.21
COL13A1-214ENST00000522165 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms