RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 SNX17Q15036 470 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 AAK1Q2M2I8 961 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 EPHA10Q5JZY3 1008 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 MFSD14CQ5VZR4 134 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 ANO1Q5XXA6 986 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 GPR142Q7Z601 462 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 TSPYL6Q8N831 410 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 ARRDC4Q8NCT1 418 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 FERMT2Q96AC1 680 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 APBA2Q99767 749 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 PBX4Q9BYU1 374 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 PORCNQ9H237 461 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 TLR7Q9NYK1 1049 aaKnown RBP6.7□□□□□ -1.34
PTPN4-210ENST00000485247 FLRT1Q9NZU1 646 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 FRRS1LQ9P0K9 344 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 SUGT1Q9Y2Z0 365 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 TACC3Q9Y6A5 838 aa6.7□□□□□ -1.34
PTPN4-210ENST00000485247 FRMPD3Q5JV73 1810 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 PHIPQ8WWQ0 1821 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 DDTLA6NHG4 134 aaPredicted RBP6.69□□□□□ -1.34
PTPN4-210ENST00000485247 KBTBD13C9JR72 458 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 CLTBP09497 229 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 ZEB1P37275 1124 aaPredicted RBP6.69□□□□□ -1.34
PTPN4-210ENST00000485247 ADCYAP1R1P41586 468 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 ZAP70P43403 619 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 PCSK7Q16549 785 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 PLEKHH3Q7Z736 793 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 LINS1Q8NG48 757 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 EDC3Q96F86 508 aaKnown RBP6.69□□□□□ -1.34
PTPN4-210ENST00000485247 PAGR1Q9BTK6 254 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 STK31Q9BXU1 1019 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 CWC22Q9HCG8 908 aaKnown RBP6.69□□□□□ -1.34
PTPN4-210ENST00000485247 STIM2Q9P246 746 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 UTYO14607 1347 aa6.69□□□□□ -1.34
PTPN4-210ENST00000485247 RLFQ13129 1914 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 CARNS1A5YM72 827 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 J3QW42 95 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 K7ELQ4 463 aaPredicted RBP6.68□□□□□ -1.34
PTPN4-210ENST00000485247 ENTPD3O75355 529 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 HOXD8P13378 290 aaPredicted RBP6.68□□□□□ -1.34
PTPN4-210ENST00000485247 SELPP16109 830 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 CYP2C19P33261 490 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 GATA4P43694 442 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 HERVK_113P62684 666 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 ERVK-24P63145 666 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 ATP2B2Q01814 1243 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 NHLH1Q02575 133 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 PICALMQ13492 652 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 DOC2BQ14184 412 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 ELMSAN1Q6PJG2 1045 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 DMRTC2Q8IXT2 367 aaPredicted RBP6.68□□□□□ -1.34
PTPN4-210ENST00000485247 TRPV1Q8NER1 839 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 DNAAF4Q8WXU2 420 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 RUNDC1Q96C34 613 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 NSUN5Q96P11 429 aaKnown RBP6.68□□□□□ -1.34
PTPN4-210ENST00000485247 UIMC1Q96RL1 719 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTPN4-210ENST00000485247 CHMP4AQ9BY43 222 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 IFT57Q9NWB7 429 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 RBPJLQ9UBG7 517 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 DOCK1Q14185 1865 aa6.68□□□□□ -1.34
PTPN4-210ENST00000485247 KIAA0355O15063 1070 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 ERC2O15083 957 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 PQBP1O60828 265 aaKnown RBP6.67□□□□□ -1.34
PTPN4-210ENST00000485247 EIF2AK2P19525 551 aaKnown RBP6.67□□□□□ -1.34
PTPN4-210ENST00000485247 ITGB7P26010 798 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 PRDX5P30044 214 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 GNAI1P63096 354 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 METTL24Q5JXM2 366 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 WDR78Q5VTH9 848 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 SHISA2Q6UWI4 295 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 FMR1NBQ8N0W7 255 aaPredicted RBP6.67□□□□□ -1.34
PTPN4-210ENST00000485247 NPLOC4Q8TAT6 608 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 WDR66Q8TBY9 1149 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 GPR152Q8TDT2 470 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 IDI2Q9BXS1 227 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 SMG9Q9H0W8 520 aaKnown RBP6.67□□□□□ -1.34
PTPN4-210ENST00000485247 NKX2-4Q9H2Z4 354 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.67□□□□□ -1.34
PTPN4-210ENST00000485247 TMEM39AQ9NV64 488 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 MSRAQ9UJ68 235 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 MROH5Q6ZUA9 1318 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 MYBBP1AQ9BQG0 1328 aaKnown RBP6.67□□□□□ -1.34
PTPN4-210ENST00000485247 LOC285556D6RIA3 1793 aa6.67□□□□□ -1.34
PTPN4-210ENST00000485247 DOCK2Q92608 1830 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 PLXNA1Q9UIW2 1896 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 CACNA1AO00555 2505 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 PRR33A8MZF0 331 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 PI4K2BG5E9Z4 385 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 LDHBP07195 334 aaKnown RBP6.66□□□□□ -1.34
PTPN4-210ENST00000485247 PSAPP07602 524 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 CYBAP13498 195 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 SOX18P35713 384 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 LRRC41Q15345 812 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 LRRC24Q50LG9 513 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 ATCAYQ86WG3 371 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 SLC44A5Q8NCS7 719 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 PIK3R5Q8WYR1 880 aa6.66□□□□□ -1.34
PTPN4-210ENST00000485247 HERVK_113Q902F9 699 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms