RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	RETREG2	Q8NC44	543 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	DNER	Q8NFT8	737 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	ZFP91	Q96JP5	570 aa	Predicted RBP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	C17orf80	Q9BSJ5	609 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	GPHN	Q9NQX3	736 aa	Predicted RBP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	GTF2IRD1	Q9UHL9	959 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	COG5	Q9UP83	839 aa		11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	TRIP12	Q14669	1992 aa	Predicted RBP	11.32	□□□□□ -0.6
MCF2L-223	ENST00000473345	PI4K2B	G5E9Z4	385 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	GPR37L1	O60883	481 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	PPP1R11	O60927	126 aa	Predicted RBP	11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	LGR5	O75473	907 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	SELP	P16109	830 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	ERVK-21	P61565	698 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	AAK1	Q2M2I8	961 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	TMEM31	Q5JXX7	168 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	ZNF618	Q5T7W0	954 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	IL31RA	Q8NI17	732 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	ALG1	Q9BT22	464 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	CHMP4B	Q9H444	224 aa	Known RBP	11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	UBE2Z	Q9H832	354 aa	Predicted RBP	11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	TOMM22	Q9NS69	142 aa		11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	DDX41	Q9UJV9	622 aa	Known RBP	11.31	□□□□□ -0.6
MCF2L-223	ENST00000473345	PSEN2	P49810	448 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	PDE1A	P54750	535 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	SP2	Q02086	613 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	BFSP2	Q13515	415 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	CDC37	Q16543	378 aa	Predicted RBP	11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	CNKSR3	Q6P9H4	555 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	FAM178B	Q8IXR5	827 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	CAGE1	Q8TC20	777 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	AFAP1L1	Q8TED9	768 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	HELLS	Q9NRZ9	838 aa		11.3	□□□□□ -0.6
MCF2L-223	ENST00000473345	KPNA6	O60684	536 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	F2	P00734	622 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	GH1	P01241	217 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	HOXD8	P13378	290 aa	Predicted RBP	11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	EIF2AK2	P19525	551 aa	Known RBP	11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	QRICH1	Q2TAL8	776 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	PPP4R3B	Q5MIZ7	849 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	ADGRF4	Q8IZF3	695 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	STAG2	Q8N3U4	1231 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	RGS22	Q8NE09	1264 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	RAD9A	Q99638	391 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	IL25	Q9H293	177 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	ZMYM6	O95789	1325 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	BRWD1	Q9NSI6	2320 aa		11.29	□□□□□ -0.6
MCF2L-223	ENST00000473345	KIF28P	B7ZC32	967 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	LINC00271	P0C7V0	271 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	KCNA5	P22460	613 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	KCNJ6	P48051	423 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	MFSD10	Q14728	455 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	KIAA0753	Q2KHM9	967 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	HSDL1	Q3SXM5	330 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	LEXM	Q3ZCV2	418 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	MCMDC2	Q4G0Z9	681 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	DBF4B	Q8NFT6	615 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	SP7	Q8TDD2	431 aa	Predicted RBP	11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	EVI5L	Q96CN4	794 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	TGS1	Q96RS0	853 aa	Known RBP	11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	C16orf70	Q9BSU1	422 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	JMJD4	Q9H9V9	463 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	NOD1	Q9Y239	953 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	SI	P14410	1827 aa		11.28	□□□□□ -0.6
MCF2L-223	ENST00000473345	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345		H3BQ06	376 aa	Predicted RBP	11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	HOXC8	P31273	242 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	HTRA4	P83105	476 aa	Predicted RBP	11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	ANKRD45	Q5TZF3	282 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	ALYREF	Q86V81	257 aa	Known RBP	11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	EMID1	Q96A84	441 aa	Predicted RBP	11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	YTHDC1	Q96MU7	727 aa	Known RBP	11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	TTC14	Q96N46	770 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	RMDN3	Q96TC7	470 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	ZBED2	Q9BTP6	218 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	PXMP2	Q9NR77	195 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	LMCD1	Q9NZU5	365 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	CCDC171	Q6TFL3	1326 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	RAD50	Q92878	1312 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	ATG2A	Q2TAZ0	1938 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	KIAA1217	Q5T5P2	1943 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	COL4A6	Q14031	1691 aa		11.27	□□□□□ -0.61
MCF2L-223	ENST00000473345	GRXCR2	A6NFK2	248 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345		B4E1Z4	1266 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	KDM4A	O75164	1064 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	NR3C2	P08235	984 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	CAST	P20810	708 aa	Known RBP	11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	HOXA13	P31271	388 aa	Predicted RBP	11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	HSD17B4	P51659	736 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	PTK7	Q13308	1070 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	COL19A1	Q14993	1142 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	DGKD	Q16760	1214 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	EPC2	Q52LR7	807 aa		11.26	□□□□□ -0.61
MCF2L-223	ENST00000473345	BRDT	Q58F21	947 aa	Predicted RBP	11.26	□□□□□ -0.61

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