RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 CTAGE1Q96RT6 745 aa13.57□□□□□ -0.24
SNU13-207ENST00000469522 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
SNU13-207ENST00000469522 ALDH8A1Q9H2A2 487 aaPredicted RBP13.57□□□□□ -0.24
SNU13-207ENST00000469522 BCAS3Q9H6U6 928 aa13.57□□□□□ -0.24
SNU13-207ENST00000469522 TRMT13Q9NUP7 481 aaKnown RBP13.57□□□□□ -0.24
SNU13-207ENST00000469522 DDX41Q9UJV9 622 aaKnown RBP13.57□□□□□ -0.24
SNU13-207ENST00000469522 TRIP12Q14669 1992 aaPredicted RBP13.57□□□□□ -0.24
SNU13-207ENST00000469522 hCG_1642624A0A1W2PR95 340 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 MMP3P08254 477 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 CPT1AP50416 773 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 SP2Q02086 613 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 STXBP2Q15833 593 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 TMEM240Q5SV17 173 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 RASIP1Q5U651 963 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 VSIG10LQ86VR7 867 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 AFG1LQ8WV93 481 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 KCNB2Q92953 911 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 MTG1Q9BT17 334 aaPredicted RBP13.56□□□□□ -0.24
SNU13-207ENST00000469522 POLR3EQ9NVU0 708 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 BRPF3Q9ULD4 1205 aa13.56□□□□□ -0.24
SNU13-207ENST00000469522 MEIS2O14770 477 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 ZEB2O60315 1214 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 EIF3JO75822 258 aaKnown RBP13.55□□□□□ -0.24
SNU13-207ENST00000469522 NEFLP07196 543 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 ACRP10323 421 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 CYP2C9P11712 490 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 CPA1P15085 419 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 SMARCA1P28370 1054 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 MRPS9P82933 396 aaKnown RBP13.55□□□□□ -0.24
SNU13-207ENST00000469522 FUT2Q10981 343 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 SEMA3FQ13275 785 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 TMTC3Q6ZXV5 915 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 TMTC2Q8N394 836 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 TTYH1Q9H313 450 aaPredicted RBP13.55□□□□□ -0.24
SNU13-207ENST00000469522 MAP3K20Q9NYL2 800 aaKnown RBP13.55□□□□□ -0.24
SNU13-207ENST00000469522 TELO2Q9Y4R8 837 aa13.55□□□□□ -0.24
SNU13-207ENST00000469522 PTPRSQ13332 1948 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 GCOM1H8Y6P7 765 aaPredicted RBP13.54□□□□□ -0.24
SNU13-207ENST00000469522 TLR3O15455 904 aaKnown RBP13.54□□□□□ -0.24
SNU13-207ENST00000469522 GH1P01241 217 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 POLR2MP0CAP2 368 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 MYCLP12524 364 aaPredicted RBP13.54□□□□□ -0.24
SNU13-207ENST00000469522 HOXD8P13378 290 aaPredicted RBP13.54□□□□□ -0.24
SNU13-207ENST00000469522 CCL23P55773 120 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 RNF20Q5VTR2 975 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 APOA5Q6Q788 366 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 USP17L6PQ6QN14 398 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 FCHSD1Q86WN1 690 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 SAMD3Q8N6K7 520 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 CTCFLQ8NI51 663 aaPredicted RBP13.54□□□□□ -0.24
SNU13-207ENST00000469522 EMID1Q96A84 441 aaPredicted RBP13.54□□□□□ -0.24
SNU13-207ENST00000469522 RNPC3Q96LT9 517 aaKnown RBP13.54□□□□□ -0.24
SNU13-207ENST00000469522 NEK1Q96PY6 1258 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 HIPK3Q9H422 1215 aa13.54□□□□□ -0.24
SNU13-207ENST00000469522 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
SNU13-207ENST00000469522 TRANK1O15050 2925 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 SORBS3O60504 671 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 UBA1P22314 1058 aaKnown RBP13.53□□□□□ -0.24
SNU13-207ENST00000469522 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
SNU13-207ENST00000469522 HIC1Q14526 733 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 NFXL1Q6ZNB6 911 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 ZNF365Q70YC5 407 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 MICU3Q86XE3 530 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 FANCBQ8NB91 859 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 SCLYQ96I15 445 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 FAM161BQ96MY7 647 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 CXXC1Q9P0U4 656 aaPredicted RBP13.53□□□□□ -0.24
SNU13-207ENST00000469522 MRVI1Q9Y6F6 885 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
SNU13-207ENST00000469522 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 HAS3O00219 553 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 PIK3CDO00329 1044 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 KIF5BP33176 963 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 PPIGQ13427 754 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNU13-207ENST00000469522 HSDL1Q3SXM5 330 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 BRDTQ58F21 947 aaPredicted RBP13.52□□□□□ -0.25
SNU13-207ENST00000469522 NFRKBQ6P4R8 1299 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 DHX32Q7L7V1 743 aaKnown RBP13.52□□□□□ -0.25
SNU13-207ENST00000469522 CCDC82Q8N4S0 544 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 DHX38Q92620 1227 aaKnown RBP13.52□□□□□ -0.25
SNU13-207ENST00000469522 RRP36Q96EU6 259 aaKnown RBP13.52□□□□□ -0.25
SNU13-207ENST00000469522 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.25
SNU13-207ENST00000469522 IL23AQ9NPF7 189 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 SLC12A7Q9Y666 1083 aa13.52□□□□□ -0.25
SNU13-207ENST00000469522 KPNA6O60684 536 aa13.51□□□□□ -0.25
SNU13-207ENST00000469522 F2P00734 622 aa13.51□□□□□ -0.25
SNU13-207ENST00000469522 ZNF286BP0CG31 522 aa13.51□□□□□ -0.25
SNU13-207ENST00000469522 CDC27P30260 824 aa13.51□□□□□ -0.25
SNU13-207ENST00000469522 CCND2P30279 289 aa13.51□□□□□ -0.25
SNU13-207ENST00000469522 HSPA4P34932 840 aa13.51□□□□□ -0.25
SNU13-207ENST00000469522 PBX2P40425 430 aa13.51□□□□□ -0.25
SNU13-207ENST00000469522 GPNMBQ14956 572 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms