RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 SP2Q02086 613 aa23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 FAM109BQ6ICB4 259 aaPredicted RBP23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 MFSD5Q6N075 450 aa23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 KAT2BQ92831 832 aa23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 FAM161BQ96MY7 647 aa23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 MTG1Q9BT17 334 aaPredicted RBP23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 NOC4LQ9BVI4 516 aaKnown RBP23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 WNT8AQ9H1J5 351 aa23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 POLR3EQ9NVU0 708 aa23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 TELO2Q9Y4R8 837 aa23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 DOCK5Q9H7D0 1870 aa23.53■■□□□ 1.36
CCHCR1-209ENST00000455279 EIF3JO75822 258 aaKnown RBP23.52■■□□□ 1.36
CCHCR1-209ENST00000455279 CCL23P55773 120 aa23.52■■□□□ 1.36
CCHCR1-209ENST00000455279 CHMP4BP1P59074 171 aa23.52■■□□□ 1.36
CCHCR1-209ENST00000455279 TMTC3Q6ZXV5 915 aa23.52■■□□□ 1.36
CCHCR1-209ENST00000455279 VSIG10LQ86VR7 867 aa23.52■■□□□ 1.36
CCHCR1-209ENST00000455279 SGMS1Q86VZ5 419 aa23.52■■□□□ 1.36
CCHCR1-209ENST00000455279 RRP36Q96EU6 259 aaKnown RBP23.52■■□□□ 1.36
CCHCR1-209ENST00000455279 SLC12A7Q9Y666 1083 aa23.52■■□□□ 1.36
CCHCR1-209ENST00000455279 SCN5AQ14524 2016 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 B4DLN1 442 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 MEIS2O14770 477 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 TLR3O15455 904 aaKnown RBP23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 GH1P01241 217 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 KIF5BP33176 963 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 MRPL12P52815 198 aaKnown RBP23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 MRPS9P82933 396 aaKnown RBP23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 TSGA10IPQ3SY00 556 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 TMEM240Q5SV17 173 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 APOA5Q6Q788 366 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 FANCBQ8NB91 859 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 RNPC3Q96LT9 517 aaKnown RBP23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 HIPK3Q9H422 1215 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 MRVI1Q9Y6F6 885 aa23.51■■□□□ 1.35
CCHCR1-209ENST00000455279 SEMA3FQ13275 785 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 FAM47CQ5HY64 1035 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 RNF20Q5VTR2 975 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 DHX32Q7L7V1 743 aaKnown RBP23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 KCNB2Q92953 911 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 SCLYQ96I15 445 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 FAM217BQ9NTX9 383 aaPredicted RBP23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 MTMR10Q9NXD2 777 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 SNX14Q9Y5W7 946 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 FRMPD4Q14CM0 1322 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 CNTNAP5Q8WYK1 1306 aa23.5■■□□□ 1.35
CCHCR1-209ENST00000455279 FUT2Q10981 343 aa23.49■■□□□ 1.35
CCHCR1-209ENST00000455279 UBE2SQ16763 222 aa23.49■■□□□ 1.35
CCHCR1-209ENST00000455279 TYW1BQ6NUM6 668 aa23.49■■□□□ 1.35
CCHCR1-209ENST00000455279 TMTC2Q8N394 836 aa23.49■■□□□ 1.35
CCHCR1-209ENST00000455279 CTAGE1Q96RT6 745 aa23.49■■□□□ 1.35
CCHCR1-209ENST00000455279 MAP3K20Q9NYL2 800 aaKnown RBP23.49■■□□□ 1.35
CCHCR1-209ENST00000455279 RTEL1Q9NZ71 1219 aa23.49■■□□□ 1.35
CCHCR1-209ENST00000455279 GRXCR1A8MXD5 290 aa23.48■■□□□ 1.35
CCHCR1-209ENST00000455279 ZNF286BP0CG31 522 aa23.48■■□□□ 1.35
CCHCR1-209ENST00000455279 UBA1P22314 1058 aaKnown RBP23.48■■□□□ 1.35
CCHCR1-209ENST00000455279 SMARCA1P28370 1054 aa23.48■■□□□ 1.35
CCHCR1-209ENST00000455279 CDC27P30260 824 aa23.48■■□□□ 1.35
CCHCR1-209ENST00000455279 HSPA4P34932 840 aa23.48■■□□□ 1.35
CCHCR1-209ENST00000455279 ZNF365Q70YC5 407 aa23.48■■□□□ 1.35
CCHCR1-209ENST00000455279 GUCD1Q96NT3 240 aa23.48■■□□□ 1.35
CCHCR1-209ENST00000455279 CCND2P30279 289 aa23.47■■□□□ 1.35
CCHCR1-209ENST00000455279 GPR153Q6NV75 609 aa23.47■■□□□ 1.35
CCHCR1-209ENST00000455279 LZTS2Q9BRK4 669 aa23.47■■□□□ 1.35
CCHCR1-209ENST00000455279 TTYH1Q9H313 450 aaPredicted RBP23.47■■□□□ 1.35
CCHCR1-209ENST00000455279 CXXC1Q9P0U4 656 aaPredicted RBP23.47■■□□□ 1.35
CCHCR1-209ENST00000455279 KLF18A0A0U1RQI7 1052 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 GGPS1O95749 300 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 CALM1P0DP23 149 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 CALM2P0DP24 149 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 CALM3P0DP25 149 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 GNAQP50148 359 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 APOBRQ0VD83 1088 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 PPIGQ13427 754 aaKnown RBP eCLIP23.46■■□□□ 1.357e-7■■■□□ 18.8
CCHCR1-209ENST00000455279 HIC1Q14526 733 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 HSDL1Q3SXM5 330 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 MYSM1Q5VVJ2 828 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 SAMD3Q8N6K7 520 aa23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 JAKMIP1Q96N16 626 aaKnown RBP23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 SEC63Q9UGP8 760 aaKnown RBP23.46■■□□□ 1.35
CCHCR1-209ENST00000455279 TRIP12Q14669 1992 aaPredicted RBP23.45■■□□□ 1.35
CCHCR1-209ENST00000455279 CELF3Q5SZQ8 465 aaKnown RBP23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 RASIP1Q5U651 963 aa23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 WWC2Q6AWC2 1192 aa23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 GDF6Q6KF10 455 aaPredicted RBP23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 DHX37Q8IY37 1157 aaKnown RBP23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 TMEM199Q8N511 208 aa23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 SMARCC2Q8TAQ2 1214 aa23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 EMID1Q96A84 441 aaPredicted RBP23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 ALG1Q9BT22 464 aa23.45■■□□□ 1.34
CCHCR1-209ENST00000455279 TET1Q8NFU7 2136 aa23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 ADAMTS3O15072 1205 aa23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 NEFLP07196 543 aa23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 ZNF200P98182 395 aaPredicted RBP23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 RTN1Q16799 776 aa23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 BRDTQ58F21 947 aaPredicted RBP23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 Q6ZUG5 572 aa23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 DHX38Q92620 1227 aaKnown RBP23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 PGBD1Q96JS3 809 aa23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 IL23AQ9NPF7 189 aa23.44■■□□□ 1.34
CCHCR1-209ENST00000455279 GOLGA8AA7E2F4 631 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms