RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 AKT3Q9Y243 479 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 EMC9Q9Y3B6 208 aa7.5□□□□□ -1.21
LINC00458-202ENST00000427299 SGSM2O43147 1006 aa7.49□□□□□ -1.21
LINC00458-202ENST00000427299 SCRN1Q12765 414 aa7.49□□□□□ -1.21
LINC00458-202ENST00000427299 PRR31Q5SQ13 230 aa7.49□□□□□ -1.21
LINC00458-202ENST00000427299 METTL16Q86W50 562 aaKnown RBP7.49□□□□□ -1.21
LINC00458-202ENST00000427299 GPRASP2Q96D09 838 aa7.49□□□□□ -1.21
LINC00458-202ENST00000427299 AP5M1Q9H0R1 490 aa7.49□□□□□ -1.21
LINC00458-202ENST00000427299 SMARCA2P51531 1590 aa7.49□□□□□ -1.21
LINC00458-202ENST00000427299 CECR2Q9BXF3 1484 aa7.49□□□□□ -1.21
LINC00458-202ENST00000427299 KCNH1O95259 989 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 ZNF20P17024 532 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 CASP7P55210 303 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 ZXDAP98168 799 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 KIAA2012Q0VF49 1180 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 EEA1Q15075 1411 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 KIAA1211LQ6NV74 962 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 TTLL6Q8N841 843 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 C8orf49Q96NF6 230 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 SSBP3Q9BWW4 388 aaPredicted RBP7.48□□□□□ -1.21
LINC00458-202ENST00000427299 INVSQ9Y283 1065 aa7.48□□□□□ -1.21
LINC00458-202ENST00000427299 PEG3Q9GZU2 1588 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 SCAMP3O14828 347 aaKnown RBP7.47□□□□□ -1.21
LINC00458-202ENST00000427299 AKAP8O43823 692 aaKnown RBP7.47□□□□□ -1.21
LINC00458-202ENST00000427299 THBDP07204 575 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 SLC6A11P48066 632 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 ITGA1P56199 1179 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 PPP2R5EQ16537 467 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 INF2Q27J81 1249 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 C9orf131Q5VYM1 1079 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 VHLLQ6RSH7 139 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 CD300LDQ6UXZ3 194 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 TEX2Q8IWB9 1127 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 LGI4Q8N135 537 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 BVESQ8NE79 360 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 LOXL4Q96JB6 756 aa7.47□□□□□ -1.21
LINC00458-202ENST00000427299 MROH6A6NGR9 719 aa7.46□□□□□ -1.22
LINC00458-202ENST00000427299 GJA8P48165 433 aa7.46□□□□□ -1.22
LINC00458-202ENST00000427299 CYP4F3Q08477 520 aa7.46□□□□□ -1.22
LINC00458-202ENST00000427299 ZC3H18Q86VM9 953 aaKnown RBP7.46□□□□□ -1.22
LINC00458-202ENST00000427299 CRACR2BQ8N4Y2 399 aaPredicted RBP7.46□□□□□ -1.22
LINC00458-202ENST00000427299 SEC14L1Q92503 715 aa7.46□□□□□ -1.22
LINC00458-202ENST00000427299 C22orf46C9J442 243 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 TCF3P15923 654 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 BORAQ6PGQ7 559 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 POMZP3Q6PJE2 187 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 STK32CQ86UX6 486 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 RIOX2Q8IUF8 465 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 FAM126BQ8IXS8 530 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 Q8N1Y9 231 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 FAM169BQ8N8A8 192 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 TXNDC5Q8NBS9 432 aaKnown RBP7.45□□□□□ -1.22
LINC00458-202ENST00000427299 NPLOC4Q8TAT6 608 aa7.45□□□□□ -1.22
LINC00458-202ENST00000427299 NASPP49321 788 aaPredicted RBP7.44□□□□□ -1.22
LINC00458-202ENST00000427299 ZNF143P52747 638 aaPredicted RBP7.44□□□□□ -1.22
LINC00458-202ENST00000427299 MCTP2Q6DN12 878 aa7.44□□□□□ -1.22
LINC00458-202ENST00000427299 GTF2IRD2BQ6EKJ0 949 aa7.44□□□□□ -1.22
LINC00458-202ENST00000427299 GTF2IRD2Q86UP8 949 aa7.44□□□□□ -1.22
LINC00458-202ENST00000427299 FAM124AQ86V42 546 aa7.44□□□□□ -1.22
LINC00458-202ENST00000427299 TRIM59Q8IWR1 403 aa7.44□□□□□ -1.22
LINC00458-202ENST00000427299 FRS2Q8WU20 508 aa7.44□□□□□ -1.22
LINC00458-202ENST00000427299 CYP26B1Q9NR63 512 aa7.44□□□□□ -1.22
LINC00458-202ENST00000427299 BTG4Q9NY30 223 aa7.44□□□□□ -1.22
LINC00458-202ENST00000427299 FPR2P25090 351 aa7.43□□□□□ -1.22
LINC00458-202ENST00000427299 MROH9Q5TGP6 573 aa7.43□□□□□ -1.22
LINC00458-202ENST00000427299 MRGPRX3Q96LB0 322 aa7.43□□□□□ -1.22
LINC00458-202ENST00000427299 APBA2Q99767 749 aa7.43□□□□□ -1.22
LINC00458-202ENST00000427299 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
LINC00458-202ENST00000427299 NKX2-4Q9H2Z4 354 aa7.43□□□□□ -1.22
LINC00458-202ENST00000427299 LOC105371045A0A1W2PR82 267 aa7.42□□□□□ -1.22
LINC00458-202ENST00000427299 DDX3XO00571 662 aaKnown RBP eCLIP7.42□□□□□ -1.22
LINC00458-202ENST00000427299 STAT5AP42229 794 aa7.42□□□□□ -1.22
LINC00458-202ENST00000427299 CR1LQ2VPA4 569 aa7.42□□□□□ -1.22
LINC00458-202ENST00000427299 MILR1Q7Z6M3 343 aa7.42□□□□□ -1.22
LINC00458-202ENST00000427299 NLRP10Q86W26 655 aa7.42□□□□□ -1.22
LINC00458-202ENST00000427299 DVL3Q92997 716 aaPredicted RBP7.42□□□□□ -1.22
LINC00458-202ENST00000427299 X6R8D5 127 aa7.42□□□□□ -1.22
LINC00458-202ENST00000427299 WRNQ14191 1432 aaPredicted RBP eCLIP7.42□□□□□ -1.22
LINC00458-202ENST00000427299 KIF21BO75037 1637 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 NOP56O00567 594 aaKnown RBP7.41□□□□□ -1.22
LINC00458-202ENST00000427299 B4GALT3O60512 393 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 ZNF28P17035 718 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 ADAM9Q13443 819 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 LIMS2Q7Z4I7 341 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 CCDC103Q8IW40 242 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 LCORQ96JN0 433 aaPredicted RBP7.41□□□□□ -1.22
LINC00458-202ENST00000427299 LGR4Q9BXB1 951 aa7.41□□□□□ -1.22
LINC00458-202ENST00000427299 NGRNQ9NPE2 291 aaKnown RBP7.41□□□□□ -1.22
LINC00458-202ENST00000427299 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.41□□□□□ -1.22
LINC00458-202ENST00000427299 TIMM13Q9Y5L4 95 aaPredicted RBP7.41□□□□□ -1.22
LINC00458-202ENST00000427299 ARNTLO00327 626 aa7.4□□□□□ -1.22
LINC00458-202ENST00000427299 NAT2P11245 290 aa7.4□□□□□ -1.22
LINC00458-202ENST00000427299 RPL11P62913 178 aaKnown RBP7.4□□□□□ -1.22
LINC00458-202ENST00000427299 HDLBPQ00341 1268 aaKnown RBP7.4□□□□□ -1.22
LINC00458-202ENST00000427299 SLC16A11Q8NCK7 471 aa7.4□□□□□ -1.22
LINC00458-202ENST00000427299 CPLX3Q8WVH0 158 aa7.4□□□□□ -1.22
LINC00458-202ENST00000427299 SEC16BQ96JE7 1060 aa7.4□□□□□ -1.22
LINC00458-202ENST00000427299 ST6GALNAC2Q9UJ37 374 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms