RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 ELP1O95163 1332 aa24.62■■□□□ 1.53
CPNE1-211ENST00000420363 LAMA2P24043 3122 aaKnown RBP24.62■■□□□ 1.53
CPNE1-211ENST00000420363 EIF3JO75822 258 aaKnown RBP24.62■■□□□ 1.53
CPNE1-211ENST00000420363 ASGR1P07306 291 aa24.62■■□□□ 1.53
CPNE1-211ENST00000420363 GNASQ5JWF2 1037 aa24.62■■□□□ 1.53
CPNE1-211ENST00000420363 C9orf50Q5SZB4 431 aa24.62■■□□□ 1.53
CPNE1-211ENST00000420363 ZNF697Q5TEC3 545 aa24.62■■□□□ 1.53
CPNE1-211ENST00000420363 NAP1L2Q9ULW6 460 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-211ENST00000420363 ZEB2O60315 1214 aa24.61■■□□□ 1.53
CPNE1-211ENST00000420363 CLTBP09497 229 aa24.61■■□□□ 1.53
CPNE1-211ENST00000420363 TOB2Q14106 344 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-211ENST00000420363 PGM5Q15124 567 aa24.61■■□□□ 1.53
CPNE1-211ENST00000420363 GLT1D1Q96MS3 346 aa24.61■■□□□ 1.53
CPNE1-211ENST00000420363 STARD7Q9NQZ5 370 aa24.61■■□□□ 1.53
CPNE1-211ENST00000420363 MEIS2O14770 477 aa24.6■■□□□ 1.53
CPNE1-211ENST00000420363 DYNC1LI2O43237 492 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-211ENST00000420363 PQBP1O60828 265 aaKnown RBP24.6■■□□□ 1.53
CPNE1-211ENST00000420363 CABYRO75952 493 aa24.6■■□□□ 1.53
CPNE1-211ENST00000420363 CCDC62Q6P9F0 684 aa24.6■■□□□ 1.53
CPNE1-211ENST00000420363 HEATR3Q7Z4Q2 680 aa24.6■■□□□ 1.53
CPNE1-211ENST00000420363 VSIG10LQ86VR7 867 aa24.6■■□□□ 1.53
CPNE1-211ENST00000420363 GUCD1Q96NT3 240 aa24.6■■□□□ 1.53
CPNE1-211ENST00000420363 UPF3BQ9BZI7 483 aaKnown RBP24.6■■□□□ 1.53
CPNE1-211ENST00000420363 hCG_1642624A0A1W2PR95 340 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 STAM2O75886 525 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 TXNP10599 105 aaKnown RBP24.59■■□□□ 1.53
CPNE1-211ENST00000420363 CCND2P30279 289 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 CPT1AP50416 773 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 IRX5P78411 483 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-211ENST00000420363 TMEM63BQ5T3F8 832 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 WWC2Q6AWC2 1192 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 FCHSD1Q86WN1 690 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 SMARCC2Q8TAQ2 1214 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 PSTPIP2Q9H939 334 aa24.59■■□□□ 1.53
CPNE1-211ENST00000420363 LTBP2Q14767 1821 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 ARIH2O95376 493 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 RAG1P15918 1043 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 PDIA3P30101 505 aaKnown RBP24.58■■□□□ 1.53
CPNE1-211ENST00000420363 ADD1P35611 737 aaKnown RBP24.58■■□□□ 1.53
CPNE1-211ENST00000420363 BEX3Q00994 111 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 KCNV1Q6PIU1 500 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 USP17L6PQ6QN14 398 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 OR6J1Q8NGC5 347 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 IL31RAQ8NI17 732 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 GPKOWQ92917 476 aaPredicted RBP eCLIP24.58■■□□□ 1.53
CPNE1-211ENST00000420363 ZNF274Q96GC6 653 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-211ENST00000420363 TMEM39AQ9NV64 488 aa24.58■■□□□ 1.53
CPNE1-211ENST00000420363 MROH7Q68CQ1 1323 aa24.58■■□□□ 1.52
CPNE1-211ENST00000420363 A0A0U1RQG5 324 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-211ENST00000420363 DCDC2CA8MYV0 355 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 PTGS1P23219 599 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 BRDTQ58F21 947 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-211ENST00000420363 XRRA1Q6P2D8 792 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 SEPT14Q6ZU15 432 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 ANKRD33Q7Z3H0 272 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 TOX2Q96NM4 488 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 SEZ6LQ9BYH1 1024 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 ALDH8A1Q9H2A2 487 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-211ENST00000420363 PDRG1Q9NUG6 133 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 BARHL2Q9NY43 387 aa24.57■■□□□ 1.52
CPNE1-211ENST00000420363 V9GY48 417 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-211ENST00000420363 STXBP3O00186 592 aa24.56■■□□□ 1.52
CPNE1-211ENST00000420363 KIAA0355O15063 1070 aa24.56■■□□□ 1.52
CPNE1-211ENST00000420363 ITGB8P26012 769 aa24.56■■□□□ 1.52
CPNE1-211ENST00000420363 NAPAP54920 295 aa24.56■■□□□ 1.52
CPNE1-211ENST00000420363 NTRK3Q16288 839 aa24.56■■□□□ 1.52
CPNE1-211ENST00000420363 PFKFB3Q16875 520 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-211ENST00000420363 EMID1Q96A84 441 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-211ENST00000420363 RNF26Q9BY78 433 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-211ENST00000420363 GLT8D2Q9H1C3 349 aa24.56■■□□□ 1.52
CPNE1-211ENST00000420363 POLR3EQ9NVU0 708 aa24.56■■□□□ 1.52
CPNE1-211ENST00000420363 MRVI1Q9Y6F6 885 aa24.56■■□□□ 1.52
CPNE1-211ENST00000420363 SCN10AQ9Y5Y9 1956 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 A6NJR5 290 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 RGS20O76081 388 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 GH1P01241 217 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 MYCLP12524 364 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-211ENST00000420363 IFNAR1P17181 557 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 SMAD3P84022 425 aaKnown RBP24.55■■□□□ 1.52
CPNE1-211ENST00000420363 C8orf34Q49A92 452 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 VTI1AQ96AJ9 217 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 SEMA6BQ9H3T3 888 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 RIC8AQ9NPQ8 531 aa24.55■■□□□ 1.52
CPNE1-211ENST00000420363 DDX41Q9UJV9 622 aaKnown RBP24.55■■□□□ 1.52
CPNE1-211ENST00000420363 PRPF3O43395 683 aaKnown RBP24.54■■□□□ 1.52
CPNE1-211ENST00000420363 TGFB3P10600 412 aa24.54■■□□□ 1.52
CPNE1-211ENST00000420363 SCG2P13521 617 aa24.54■■□□□ 1.52
CPNE1-211ENST00000420363 ARHGAP1Q07960 439 aa24.54■■□□□ 1.52
CPNE1-211ENST00000420363 GNPTABQ3T906 1256 aa24.54■■□□□ 1.52
CPNE1-211ENST00000420363 PCNX4Q63HM2 1172 aa24.54■■□□□ 1.52
CPNE1-211ENST00000420363 TYW1BQ6NUM6 668 aa24.54■■□□□ 1.52
CPNE1-211ENST00000420363 CXCL17Q6UXB2 119 aa24.54■■□□□ 1.52
CPNE1-211ENST00000420363 RNPC3Q96LT9 517 aaKnown RBP24.54■■□□□ 1.52
CPNE1-211ENST00000420363 INPP4AQ96PE3 977 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-211ENST00000420363 ESYT2A0FGR8 921 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 ARVCFO00192 962 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 KPNA6O60684 536 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 CDK7P50613 346 aa24.53■■□□□ 1.52
CPNE1-211ENST00000420363 MRPS9P82933 396 aaKnown RBP24.53■■□□□ 1.52
CPNE1-211ENST00000420363 PURAQ00577 322 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms