RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PSMD1Q99460 953 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 ELAC2Q9BQ52 826 aaKnown RBP14.07□□□□□ -0.16
HERC3-203ENST00000407637 NEUROG2Q9H2A3 272 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 ECT2Q9H8V3 914 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 LY9Q9HBG7 655 aa14.07□□□□□ -0.16
HERC3-203ENST00000407637 PIK3C2AO00443 1686 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 WNT7AO00755 349 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 PDHA1P08559 390 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 FAM163BP0C2L3 166 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 HHATQ5VTY9 493 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 NUGGCQ68CJ6 796 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 LRRC34Q8IZ02 419 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 CCDC155Q8N6L0 562 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 ZFAND2BQ8WV99 257 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 WASF1Q92558 559 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 DDX21Q9NR30 783 aaKnown RBP eCLIP14.06□□□□□ -0.163e-6■■■□□ 18.6
HERC3-203ENST00000407637 ADAM22Q9P0K1 906 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 MAGEC2Q9UBF1 373 aaPredicted RBP14.06□□□□□ -0.16
HERC3-203ENST00000407637 GPAA1O43292 621 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 MMEP08473 750 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 EIF4A3P38919 411 aaKnown RBP14.06□□□□□ -0.16
HERC3-203ENST00000407637 CEBPAP49715 358 aaPredicted RBP14.06□□□□□ -0.16
HERC3-203ENST00000407637 TMEM67Q5HYA8 995 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 PIGWQ7Z7B1 504 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 LPIN2Q92539 896 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 TBC1D5Q92609 795 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 LRRC45Q96CN5 670 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 TRIM4Q9C037 500 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 MTFR1LQ9H019 292 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 ISCUQ9H1K1 167 aa14.06□□□□□ -0.16
HERC3-203ENST00000407637 GTPBP6O43824 516 aaPredicted RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 FTCDO95954 541 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 RPN1P04843 607 aaKnown RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 ALDH3A1P30838 453 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 FLT3P36888 993 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 ADAM9Q13443 819 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 PDIA5Q14554 519 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 PDIA6Q15084 440 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 RABL6Q3YEC7 729 aaPredicted RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 EARS2Q5JPH6 523 aaKnown RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 C1QTNF12Q5T7M4 302 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 TEX9Q8N6V9 391 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 TUBGCP2Q9BSJ2 902 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 PNMA2Q9UL42 364 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 PACSIN2Q9UNF0 486 aaPredicted RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 GPR75-ASB3A0A0A6YYF3 556 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 ASAP2O43150 1006 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 AKR1B10O60218 316 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 CHN1P15882 459 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 CDK17Q00537 523 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 CUL3Q13618 768 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 PDXDC2PQ6P474 469 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 PROSER2Q86WR7 435 aaPredicted RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 RBM41Q96IZ5 413 aaKnown RBP14.05□□□□□ -0.16
HERC3-203ENST00000407637 SYT15Q9BQS2 421 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 SAMD15Q9P1V8 674 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 WDR35Q9P2L0 1181 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 ASB3Q9Y575 518 aa14.05□□□□□ -0.16
HERC3-203ENST00000407637 ABCC12Q96J65 1359 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 NPTXRO95502 500 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 IFNAR1P17181 557 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 MAGEA1P43355 309 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 RASSF7Q02833 373 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 HLFQ16534 295 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 ATG9AQ7Z3C6 839 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 NCAPG2Q86XI2 1143 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 IGDCC4Q8TDY8 1250 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 KLHL29Q96CT2 875 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 NOX5Q96PH1 765 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 SELENOSQ9BQE4 189 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 CNOT10Q9H9A5 744 aaKnown RBP14.04□□□□□ -0.16
HERC3-203ENST00000407637 INCENPQ9NQS7 918 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 TBC1D2BQ9UPU7 963 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 SLC12A7Q9Y666 1083 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 DIP2AQ14689 1571 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 SOS2Q07890 1332 aaPredicted RBP14.04□□□□□ -0.16
HERC3-203ENST00000407637 ROBO2Q9HCK4 1378 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 MYBP10242 640 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 CCNG1P51959 295 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 SEPT2Q15019 361 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 LRRC23Q53EV4 343 aaPredicted RBP14.04□□□□□ -0.16
HERC3-203ENST00000407637 TRIM22Q8IYM9 498 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 ADSSL1Q8N142 457 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 RETREG2Q8NC44 543 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 XAGE3Q8WTP9 111 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 THAP9Q9H5L6 903 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 RNF14Q9UBS8 474 aa14.04□□□□□ -0.16
HERC3-203ENST00000407637 LMO7Q8WWI1 1683 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 LGR5O75473 907 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 SHBGP04278 402 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 MSH2P43246 934 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 TNNC1P63316 161 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 ZNF530Q6P9A1 599 aaPredicted RBP14.03□□□□□ -0.16
HERC3-203ENST00000407637 LMBR1LQ6UX01 489 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 CACNA2D4Q7Z3S7 1137 aa14.03□□□□□ -0.16
HERC3-203ENST00000407637 PCMTD2Q9NV79 361 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms